A new Knight joins Mendeley’s round table

August 26, 2008 at 7:56 pm by Paul

We are proud to introduce Robert Knight - yet another boost to our development team. It’s not that we didn’t enjoy the company of a certain other knight who said “Ni” (and from whom we rented our previous office):

Still, we think Robert is a much better fit to our team. Ni!

——

Robert Knight joins Mendeley as a software engineer working on Mendeley Desktop. He graduated with a degree in Computer Science from the University of Southampton in June 2008. In his spare time, Robert is a contributor to the KDE project and develops the Konsole terminal. In the past he also wrote the BlueIDE development environment for DarkBASIC and contributed to KSpread.

PRESS RELEASE: Research-Sharing Start-Up Mendeley Launches with Support of Last.fm Chairman and Skype’s Former Founding Engineers

August 13, 2008 at 12:13 pm by Victor

FOR IMMEDIATE RELEASE
August 13, 2008

Mendeley develops software for managing and sharing research papers as well as a website for discovering research trends and connecting to like-minded academics. The founders’ vision to create a “Last.fm for research” excited Skype’s former founding engineers, who became investors, and former Last.fm executive chairman Stefan Glänzer, who is now executive chairman of the company.

London, UK - When Mendeley’s founders started writing their PhDs, they wondered why there wasn’t a more convenient way of managing and sharing their collection of research papers. So they set out to develop a free research tool themselves, which is launching into public beta today.

Mendeley Desktop, a software client application available for Windows, Mac and Linux platforms, automatically extracts metadata, full-text and cited references from PDF files, builds up a personal research library, and offers sophisticated searching, tagging, and filtering functionality. It lets researchers share, synchronize and annotate their digital libraries collaboratively. Data from Mendeley Desktop is exchanged with Mendeley Web, an online research network where users can back up and access their library database, discover the most widely read papers in their academic discipline, and connect to like-minded scientists and researchers. “As the database of Mendeley Web grows, you will be able to view statistics about emerging research topics in every academic discipline, and readership statistics for each individual paper” explains Victor Henning, one of Mendeley’s co-founders. “Soon we will also include a recommendation engine. Basically, it’s like a Last.fm for research.”

This caught Stefan Glänzer’s attention. As seed investor and executive chairman, he helped Last.fm grow into the world’s largest social music network with over 20 million users. A few years earlier, he himself had been in academia, having financed his PhD through work as a DJ. “I wish I’d had a tool like Mendeley back then” says Mr. Glänzer. “There are striking similarities between the concepts: Based on its Audioscrobbler software, which helps users share and discover music, Last.fm was able to create the world’s largest open music database. Based on Mendeley Desktop, which helps users manage, share and discover research papers, Mendeley could achieve the same for academia.”

After joining Mendeley as executive chairman, Mr. Glänzer brought the team in touch with the former founding engineers of Skype, who had recently invested in academic publisher Versita through their investment fund ASI. Mendeley’s software won them over. “There are plenty of websites that want to become ‘the Facebook for researchers’” explains Eileen Broch, ASI’s investment director. “Mendeley, however, is not just another social network. It’s a truly valuable integration of software and web technologies that solves some of researchers’ day-to-day problems – which is why we decided to invest.”

About Mendeley: Mendeley develops software for managing and sharing research papers as well as a website for discovering research trends and connecting to like-minded academics. The company was founded in 2007 by Paul Föckler, Victor Henning and Jan Reichelt and is based in London, UK.

Screenshot 1: Mendeley Desktop is free academic software for managing and sharing research papers.

Screenshot 2: Mendeley Web lets researchers access their papers online, discover research trends and connect to like-minded scholars and academics.

For further information contact Victor Henning (victor.henning@mendeley.com), Tel: +44-207-2531595, or visit www.mendeley.com.
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Broken keyboard = hilarious dialogue

August 11, 2008 at 6:27 pm by Victor

Today in our web developer Skype chat: Paul, Falk (brother-in-law of Paul) and Pankaj (freelance database expert).

Paul Föckler, 10:46am: I added Pankaj to our web chat
Falk Kühnel, 10:46am: hiankaj
Falk Kühnel, 10:47am: damn, my eybor is bron i guess

Cracks me up!

The long night of bugfixing and other mysterious phenomena

August 6, 2008 at 11:23 pm by Victor

Let’s get the bad news out of the way first. I won’t be able to travel to the AMA Summer Conference. At this time tomorrow, I should have been at the beach of San Diego with Michael and Thorsten and a nice cold beer, but it was not to be. My cough from the viral infection hasn’t completely disappeared yet, and a weeks’ travel to California would have worsened it again… what a major bummer!

However, after a month of working from home, I have returned to the office. And as promised earlier, here’s a brief guided photo tour:

Exihibit A shows a room full of software engineers.  They occupy the west wing. They’re all so talented that they have little halos around their heads, but you can’t see them in this picture due to the backlight from the window. True story!

Exhibit B: The east wing. This is where we non-software engineers gather (notice the puny monitors and machines).

Our meeting room at lunchtime. Paul’s arm stretches out inconspicously, stealing someone’s food (or so I presume).

Our kitchen. Jan.. trying to sell me a coffee machine?!

Me in my corner, trying to take a break by hiding behind a book. Fittingly, it’s titled “Hidden Dimensions: The Unification of Physics and Consciousness“. Incredibly fascinating stuff! I’ll probably write about it on this blog later.

Outside our windows, enveloping darkness has settled in, and thus the long night of bugfixing has begun. I have witnessed a mysterious phenomenon: After dark, wherever large groups of software engineers congregate, large quantities of pizza boxes spontaneously materialize out of thin air.

A missed opportunity

July 29, 2008 at 6:32 pm by Victor

I received a very tempting offer today: A friend of mine, who’s faculty at a major research university here in London, invited me to become a guest lecturer for the next spring term and take over a class in consumer behaviour. It would have been seven sessions, three hours each.

I always enjoyed teaching, and the study of consumer behavior (with all its ethical, cultural, and economic implications) was what got me interested in a career in academia in the first place. So I really struggled with myself before turning down the offer. The classes are scheduled to start in January, hence I would have had to begin preparing the lectures in November at the latest - and there was no way of doing that if I still wanted to submit my Ph.D. thesis this year and work on Mendeley at the same time.

Luxury problems, I guess, but I still feel a little sad over this missed opportunity. Well, maybe in the fall!

If scientists were tabloid fodder

July 27, 2008 at 4:23 pm by Victor

And now for something completely different. Do you know 14? 14 is an artist who satirizes celebrity culture on her blog Gallery of the Absurd. Here’s my favourite of her paintings:

For months the world has been anticipating the arrival of the Brangelina baby. Tabloids and bloggers have been speculating that this baby is destined to be the Most Beautiful Child Ever. New York Magazine ruffled feathers when stating “Not since Jesus has a baby been so eagerly anticipated.” What I’d like to speculate is…..what if the offspring of Angelina Jolie and Brad Pitt isn’t as stunningly gorgeous as everyone assumes? What if she’s just a regular looking baby….maybe even a little goofy looking? It could happen!

Now, did you ever wonder what would happen if scientists were tabloid fodder? I actually didn’t. But 14 does:

I’ve always wondered what our culture would be like if we obsessed about the private lives and accomplishments of scientists, researchers and great thinkers the same way we obsess over celebrities. Would we follow closely the scandals of scientific study the same way we follow the scandals of Britney or Madonna? Would certain appealing scientists be given their own reality shows?

… and her answer is hilarious:

Unfortunately, my scientific achievements are not yet colossal enough for me to be included in the science tabloids. I still hope to win the Ig Noble Prize one day.

Via Gallery of the Absurd.

An excellent EuroScience adventure, Part II

July 26, 2008 at 3:48 am by Victor

After writing so much about the other fun speeches, sessions, and things to do at the ESOF2008, I didn’t manage to talk about our own session, “Euroscience’s Interactive Workshop: Development of a virtual network custom designed for scientists”, which took place on Monday afternoon.

The sessions was started off by Professors Peter Westh and Roberto Poli, who each presented their vision for an interdisciplinary network for researchers. In their view, ontologies and semantic knowledge will play a key part in establishing a useful network that is not merely a “Facebook for scientists”, but helps to connect researchers through highlighting common areas of interest or - as Prof. Westh emphasized - possible new applications of existing knowledge.

That, of course, was music to our ears. We’ve talked about our “Mendeley = Last.fm for research” vision before on this blog, but the EuroScience workshop was the perfect venue for tossing the idea around a bit further. After all, Last.fm has managed to create the largest ontological classification (and the largest open database) of music in the world, by aggregating the musical tastes of its 20 million users and then data-mining it for similar musical genres, artists, and songs.

So our presentation was aimed at exploring how these principles could be applied to research. You can find an abridged version below! I tried my best at voiceover narration, but doing it in front of my computer at midnight just doesn’t turn out as lively as standing in front of an audience:

After the talk, we got great feedback from the audience. The panel moderator, Jens Degett, even wondered whether we just might have solved the major problem of Open Access - the researchers’ lack of participation: With Mendeley, researchers have an increased incentive to post their articles online, because it enables them track the evolution of their readership in real-time!

One of the audience members who came up to us after the presentation was Anders Norgaard, a Ph.D. student from Denmark who had some cool suggestions for future features. We also talked about open sourcing Mendeley Desktop, and I mentioned to him that we had three KDE developers on our team. This is the dialog that ensued:

Anders: Oh, really? What are their names?

Me: Well, there’s Mike Arthur…

Anders: Mike Arthur? I know him, he’s quite famous in the KDE scene!

Me: …and Fred Emmott…

Anders: Fred Emmott? The guy who’s doing Slamd64?!

Me: …yes, and Robert Knight will be starting next Monday…

Anders: Robert Knight?! He’s famous, too! How did you manage to get those guys?

Well, the credit goes to Mike. I knew that we had brilliant engineers on our team, but I was clueless that they were actually famous… Mike, Fred, Robert - I tip my hat to you guys!

Defending fair use

July 24, 2008 at 10:51 pm by Victor

I wanted to write up Part II of our EuroScience Adventures today, but unfortunately, I didn’t manage to - look out for them tomorrow! However, I came across a very interesting (and, at the risk of sounding pompous, important) video today.

It describes how Chris Boulton’s thesis was repeatedly turned down for publication because its data contained copyrighted material (excerpts from fashion ads), the use of which should have fallen under the “fair use” doctrine.

For scholars who study media, the internet has broadened research horizons and expanded the reach of teaching and publications. But powerful gatekeepers remain. From academic journals seeking to control our intellectual property to lawyers crying foul when we quote from copyrighted material, we are bombarded with a myriad of confusing and dubious restrictions. In short, the implied threat of legal action creates a chilling effect that impacts us all. Some have pushed back, arguing that our educational activities are protected under the “fair use” statute. But this is a risky game to play. The rules aren’t always clear. And when it comes to fair use, we either use it, or lose it.


Via Open Students via A Blog Around the Clock.

An excellent EuroScience adventure, Part I

July 21, 2008 at 11:21 pm by Victor

Well, what can I say! The EuroScience Open Forum 2008 in Barcelona has turned out great so far. Due to its considerable greatitude and excellent greatishness, Jan decided not to let me have all the fun by myself and joined me yesterday.

On the downside, the heat and travel stress didn’t exactly help me get rid of my still-persisting cough/throat inflammation. I was barely able to sleep again for the first two nights in Barcelona, and I will need some more days rest at home when I return to London. Nonetheless, we attended some very inspiring sessions and received enthusiastic feedback on our presentation today (more on that in a later post) - let me recapitulate.

Saturday, the most interesting session was on “Open Science” or “Open Notebook Science”, on which Prof. Peter Murray-Rust from Cambridge gave a very spirited talk…

…followed by a not-so-spirited talk given by he-who-shall-not-be-named and in which every slide looked like this:

Anyhow, “Open Notebook Science” is a fairly recent idea which has gained more and more exposure in the past few months. The basic premise is that researchers should not only share their publications through Open Access outlets, but also freely publish their raw data alongside it so that it can be validated, re-purposed and aggregated.

This, of course, entails some problems: Academic careers and tenure decisions depend on publications, so how can you incentivise researchers to lay open their data before they’re certain that they have “wrung” all possible publications out of it? I believe that our “Last.fm for research” model, i.e. the chart-like tracking of which papers are being widely read, which authors are up-and-coming etc., could also be extended to raw data - thus giving credit to people who have created the raw data that others are successfully using.

Two other highlights yesterday and today were the keynote speeches by Prof. Marcus du Sautoy from Oxford and by Physiology/Medicine Nobel laureate Dr. Richard J. Roberts. Both described how they had discovered their love of science and the fields they wanted to dedicate themselves to. Little known facts:

Prof. du Sautoy originally wanted to become a spy (to get a nice black gun like his mum, who had worked for the foreign office) and thus tried to learn many different languages. By his own admission, he failed miserably because he did not find languages to be logical enough. Fortunately for him, Mathematics - and especially Symmetry, his field of expertise - offered him a way of describing and understanding the world in more logical terms. Finally, despite his obsession with symmetry, he had this wonderful quote from the 14th-century Japanese Essays in Idleness:

In everything [...] uniformity is undesirable. Leaving something incomplete makes it interesting, and gives one the feeling that there is room for growth… Even when building the imperial palace, they always leave one place unfinished.

This reminded me strikingly of the Law of Closure in Gestalt psychology which describes how the mind will try to complete figures if they are unfinished - hence deliberately leaving something incomplete will engage the mind’s creativity.

Today, then, Dr. Roberts spoke about his way from unruly, almost-expelled-from-school teenager to molecular biologist and Nobel laureate.

Dr. Roberts had actually wanted to become a professional snooker player - back in the 1960s, he was West England snooker champion. That was also when he received what he described as one of his most profound life lessons:

During a snooker tournament, he had sunk an incredible “lucky shot” - but then failed to make the next one. After the game, an old man came down from the audience and said to him:

Listen, if you sink a lucky shot like that, you have to concentrate twice as hard on your next shot. Everyone can be lucky, but if you get lucky - don’t feel bad, instead work extra hard to take advantage of it.

Seems to have worked out alright for him! After the talk, I hopped onto the stage to give Dr. Roberts a brief pitch of Mendeley, since he’s now actively involved in the Open Access movement. I’m sure that he gets loads of requests like these, but if we’re lucky, who knows - he might just find our idea interesting enough to give us some feedback.

Finally, here are two pictures of me wearing a brain helmet, looking at my brain activity (and oddly, not seeing any?!):

Phew. I should stop writing now. Must sleep. Will tell more of our exploits later. Adios!

Moving forward

July 18, 2008 at 1:29 pm by Paul

The last couple of weeks have been pretty exciting. We moved offices just in time to have enough space for all the new people who have started working for Mendeley recently. They have been working hard to optimize the software architecture, databases, interfaces, integration and usability of Mendeley Web and Mendeley Desktop.

Some of you are probably wondering why you haven’t received an invitation code yet. Well we have been working non-stop on many new features and we can’t wait to release them; so we’d rather hold off the invitations until we can present you our shiny new version. Also some major refactoring work has been done in the last weeks so we want to ensure that the version we give out is working as perfectly as possible.

Just to give you a short teaser of stuff to come…

  • Linux and MAC versions of Mendeley Desktop
  • Auto-installer of updates
  • Shared Groups (working on tags and notes of articles collaboratively)
  • Improved synchronization interface of Mendeley Desktop
  • Publication handling in Mendeley Web
  • Re-design and usability improvements of various areas of Mendeley Web
  • Personal statistics of your library
  • Speed improvements

Although there is still a reasonable amount of bugfixing left, we are trying our best to not keep you waiting too long…  as you can see, there is a lot to look forward to! :)