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The thin line between hope and hype in biomarker research.

by Patrick M M Bossuyt
Jama The Journal Of The American Medical Association ()

Abstract

In the past decades, advances in molecular biology coupled with progress in genomics, proteomics, and metabolomics have fueled hope for the development of new medical tests. Biomarkers should enable clinicians to make an earlier or more definitive diagnosis, identify persons at risk of developing disease, develop more precise estimates about prognosis, and fine-tune treatment selection, thereby approaching a form of stratified, or even personalized, medicine. With few exceptions, most of these promises have yet to be fulfilled. Only a small number of biomarkers are being used in routine clinical practice.1 No new major cancer biomarkers have been approved for clinical use for at least 25 years.2 Most clinical decisions still rely on more conventional forms of medical testing, such as existing laboratory measurements and imaging studies.

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The thin line between hope and hy...

EDITORIAL Editorials represent the opinions of the authors and JAMA and not those of the American Medical Association. The Thin Line Between Hope and Hype in Biomarker Research Patrick M. M. Bossuyt, PhD Bstarted IOMARKERS HAVE BECOME A POPULAR TOPIC IN medicine, and investigations of putative molecu- lar indicators of a specific biological state have to occupy a considerable part of health research. In the past decades, advances in molecular biol- ogy coupled with progress in genomics, proteomics, and metabolomics have fueled hope for the development of new medical tests. Biomarkers should enable clinicians to make an earlier or more definitive diagnosis, identify per- sons at risk of developing disease, develop more precise estimates about prognosis, and fine-tune treatment selec- tion, thereby approaching a form of stratified, or even personalized, medicine. With few exceptions, most of these promises have yet to be fulfilled. Only a small number of biomarkers are being used in routine clinical practice.1 No new major cancer bio- markers have been approved for clinical use for at least 25 years.2 Most clinical decisions still rely on more conven- tional forms of medical testing, such as existing laboratory measurements and imaging studies. There are several reasons for the relatively slow prog- ress. For example, molecular biomarkers for many condi- tions have yet to be identified. Other issues involve prob- lems with characterization and control of the preanalytical variability2 and suboptimal design of studies used for marker discovery and validation. Many biomarker studies have ma- jor methodological shortcomings, in particular in the se- lection of appropriate study groups for instance, some stud- iesincludeonlyextremecasesandcontrastthemwithhealthy controls. Despite these concerns, hope has been high, and hype has never been far away. In this issue of JAMA, Ioannidis and Panagiotou3 dem- onstrate that frequently cited biomarker studies reported effect sizes that were often higher than effect sizes reported in subsequent larger studies of the same biomarker and were more extreme than summary estimates reported in a meta- analysis of that biomarker. For 29 of 35 studies included in their analysis, the subsequently published meta-analysis re- ported a less optimistic effect size estimate than the highly cited study. For instance, in a 1994 study on cancer risk in 33 fami- lies with evidence of linkage to BRCA1 carriers, the au- thors compared cancer cases other than breast or ovarian cancer with national incidence rates and reported a 4.11 rela- tive excess risk for colon cancer among BRCA1 carriers.4 A study published 11 years later, in which data were summa- rized from more than 30 epidemiologic studies on cancer incidence in BRCA1 mutation carriers, found that all of the studies on colon cancer that had appeared after the 1994 study had reported smaller, and often nonsignificant, rela- tive risks.5 One of these, published in 2004, reported a non- significant odds ratio of 1.24.6 However, this study has re- ceived only 26 citations so far, compared with 1051 for the initial 1994 article.4 Likewise, in a 1991 article, the authors reported high peak serum levels of homocysteine in 16 of 38 patients with cere- brovascular disease, in 7 of 25 with peripheral vascular dis- ease, and in 18 of 60 with coronary vascular disease, but in 0 of 27 normal adults, and reported a statistically signifi- cant odds ratio of 23.9 for coronary vascular disease in pa- tients with hyperhomocysteinemia.7 A meta-analysis of hy- perhomocysteinemia, published 9 years later and including 33 studies and more than 16 000 patients,8 reported a sum- mary odds ratio for cardiovascular disease of 1.58. The ini- tial report has received 1451 citations, whereas to date, the meta-analysis has had 37 citations. It is difficult to estimate how often a study that pub- lishes a more extreme effect receives more attention than larger studies of the same marker, or than meta-analyses, which provide a summary estimate based on all available evidence, after critical appraisal. The review by Ioannidis and Panagiotou3 is not based on an ���inception cohort,��� ie, a group of studies of a biomarker defined from the first evalu- ation. The authors first selected highly cited studies and then tried to find a matching meta-analysis published after the highly cited study. They used an arbitrary threshold of 400 citations, regardless of the date of publication of the index study, and were able to match less than half of the highly cited studies to a meta-analysis. See also p 2200. Author Affiliations: Department of Clinical Epidemiology, Biostatistics, and Bio- informatics, University of Amsterdam, the Netherlands. Corresponding Author: Patrick M. M. Bossuyt, PhD, Department of Clinical Epidemiology, Biostatistics, and Bioinformatics, Academic Medical Center, Room J1b-214 PO Box 22700 1100 DE Amsterdam the Netherlands (p.m.bossuyt@amc.uva.nl). ��2011 American Medical Association. All rights reserved. JAMA, June 1, 2011���Vol 305, No. 21 2229
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Another factor involves the dynamics of study initiation, a condition for inclusion in such an analysis. New studies to evaluate biomarkers do not occur at random and are not initiated without knowledge of previous studies. Investiga- tors design a study and seek funding because they feel they have something useful, promising, or otherwise worth- while to evaluate. A large number of issues drive the bio- marker research agenda, and while some of these issues can be quite mundane, they do not occur at random. For in- stance, the likelihood of an additional evaluation of an in- dividual biomarker from a list of all potential biomarkers is not distributed evenly across biomarkers, nor should it be. This may help explain why a study with a smaller effect size more often follows a study with a large effect size than the other way around. In the latter case, the second study may never be started. Analogously, the likelihood that a meta- analysis will be conducted for a specific biomarker is not homogeneous for all biomarkers. Even more complicated processes affect the citation of pre- vious studies. Studies that are published early and appear to report novel and promising findings have a citation ad- vantage and also have more time to accrue citations. How- ever, the exact reasons for citing previous articles, and the hurdles before switching citations to more complete or more precise studies, deserve further study. The science of the sci- entific reception of biomarker evaluation studies is still in its infancy. The report by Ioannidis and Panagiotou3 is a convincing case study demonstrating that more extreme, often early as- sociations receive considerable attention and continue to do so, despite the availability of subsequent studies or meta- analyses with more precise estimates. The authors do not explain the citation advantage of the highly cited studies but refer to several mechanisms that may be responsible for the inflated effects. For instance, many studies were small, so chance plays an important role, and several used a case- control design, which is known to generate inflated re- sults.9 Most of these deficiencies can be remedied by using better study designs.10 In addition, the completeness and transparency of reporting may be improved through the use of various standardized checklists, enabling editors, review- ers, and readers to more easily assess the studies and detect study weaknesses.11 It would be premature to doubt all scientific efforts at marker discovery and unwise to discount all future bio- marker evaluation studies. However, the analysis pre- sented by Ioannidis and Panagiotou should convince clini- cians and researchers to be careful to match personal hope with professional skepticism, to apply critical appraisal of study design and close scrutiny of findings where indi- cated, and to be aware of the findings of well-conducted sys- tematic reviews and meta-analyses when evaluating the evi- dence on biomarkers. Conflict of Interest Disclosures: The author has completed and submitted the ICMJE Form for Disclosure of Potential Conflicts of Interest and none were reported. REFERENCES 1. Rifai N, Gillette MA, Carr SA. Protein biomarker discovery and validation: the long and uncertain path to clinical utility. Nat Biotechnol. 2006 24(8):971- 983. 2. Diamandis EP. Cancer biomarkers: can we turn recent failures into success? J Natl Cancer Inst. 2010 102(19):1462-1467. 3. Ioannidis JPA, Panagiotou OA. Comparison of effect sizes associated with bio- markers reported in highly cited individual articles and in subsequent meta-analyses. JAMA. 2011 305(21):2200-2210. 4. Ford D, Easton DF, Bishop DT, Narod SA, Goldgar DE Breast Cancer Linkage Consortium. Risks of cancer in BRCA1-mutation carriers. Lancet. 1994 343 (8899):692-695. 5. Friedenson B. BRCA1 and BRCA2 pathways and the risk of cancers other than breast or ovarian. MedGenMed. 2005 7(2):60. 6. Niell BL, Rennert G, Bonner JD, Almog R, Tomsho LP, Gruber SB. BRCA1 and BRCA2 founder mutations and the risk of colorectal cancer. J Natl Cancer Inst. 2004 96(1):15-21. 7. Clarke R, Daly L, Robinson K, et al. Hyperhomocysteinemia: an independent risk factor for vascular disease. N Engl J Med. 1991 324(17):1149-1155. 8. Cleophas TJ, Hornstra N, van Hoogstraten B, van der Meulen J. Homocyste- ine, a risk factor for coronary artery disease or not? a meta-analysis. Am J Cardiol. 2000 86(9):1005-1009. 9. Rutjes AW, Reitsma JB, Vandenbroucke JP, Glas AS, Bossuyt PM. Case-control and two-gate designs in diagnostic accuracy studies. Clin Chem. 2005 51(8): 1335-1341. 10. Pepe MS, Feng Z, Janes H, Bossuyt PM, Potter JD. Pivotal evaluation of the accuracy of a biomarker used for classification or prediction: standards for study design. J Natl Cancer Inst. 2008 100(20):1432-1438. 11. Bossuyt PM, Reitsma JB, Bruns DE, et al Standards for Reporting of Diagnos- tic Accuracy. Towards complete and accurate reporting of studies of diagnostic accuracy: the STARD initiative. BMJ. 2003 326(7379):41-44. EDITORIAL 2230 JAMA, June 1, 2011���Vol 305, No. 21 ��2011 American Medical Association. All rights reserved.

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