STAMPS2012

In this group: 44 papers · 17 members

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Biological Sciences

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Juan P. Maestre added a document to this group

Bacterial community comparisons by taxonomy-supervised analysis independent of sequence alignment and clustering.

26th September, 2012

Juan P. Maestre added documents to this group

Microbial diversity in the deep sea and the underexplored “rare biosphere

Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

Supervised classification of microbiota mitigates mislabeling errors.

28th August, 2012

Juan P. Maestre added a document to this group

Genomic patterns of recombination, clonal divergence and environment in marine microbial populations.

10th August, 2012

Juan P. Maestre added documents to this group

Comparative metagenomics of microbial traits within oceanic viral communities.

Characterization of the oral fungal microbiome (mycobiome) in healthy individuals.

Microbial community gene expression in ocean surface waters.

Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill.

The impact of a consortium of fermented milk strains on the gut microbiome of gnotobiotic mice and monozygotic twins.

And 2 more

9th August, 2012

Juan P. Maestre

http://www.mendeley.com/groups/1585913/human-microbiome-journal-club-library/

9th August, 2012

Diana Taft added a document to this group

UniFrac: an effective distance metric for microbial community comparison.

9th August, 2012

Juan P. Maestre added documents to this group

Microbial biogeography: putting microorganisms on the map.

Analysis of a marine picoplankton community by 16S rRNA gene cloning and sequencing.

Metagenomic sequencing of an in vitro-simulated microbial community.

8th August, 2012

Juan P. Maestre added a document to this group

TaxMan: a server to trim rRNA reference databases and inspect taxonomic coverage.

7th August, 2012

Meg Pirrung added a document to this group

Predicted Relative Metabolomic Turnover (PRMT): determining metabolic turnover from a coastal marine metagenomic dataset

6th August, 2012

Juan P. Maestre likes this.

Juan P. Maestre Preparing tomorrow's talk! Nice

7th August

Juan P. Maestre added documents to this group

Reducing the Effects of PCR Amplification and Sequencing Artifacts on 16S rRNA-Based Studies

UCHIME improves sensitivity and speed of chimera detection

Assessing and improving methods used in operational taxonomic unit-based approaches for 16S rRNA gene sequence analysis.

6th August, 2012

Juan P. Maestre added documents to this group

Removing Noise From Pyrosequenced Amplicons

Exploring Microbial Diversity and Taxonomy Using SSU rRNA Hypervariable Tag Sequencing

4th August, 2012

Meg Pirrung added documents to this group

Forensic identification using skin bacterial communities

UniFrac: an effective distance metric for microbial community comparison.

Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data.

Microbial community resemblance methods differ in their ability to detect biologically relevant patterns

The core gut microbiome, energy balance and obesity

And 3 more

3rd August, 2012

Juan P. Maestre added documents to this group

Species divergence and the measurement of microbial diversity.

Global patterns in bacterial diversity.

Short pyrosequencing reads suffice for accurate microbial community analysis.

Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers.

Bacterial community variation in human body habitats across space and time.

And 1 more

3rd August, 2012

Juan P. Maestre added documents to this group

Evaluation of the RDP Classifier Accuracy Using 16S rRNA Gene Variable Regions

Accuracy and quality of massively parallel DNA pyrosequencing.

Evaluation of genomic high-throughput sequencing data generated on Illumina HiSeq and genome analyzer systems.

2nd August, 2012

Meg Pirrung added documents to this group

PrimerProspector: de novo design and taxonomic analysis of barcoded PCR primers.

QIIME allows analysis of high-throughput community sequencing data.

2nd August, 2012

Created by Juan P. Maestre

2nd August, 2012

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Biological Sciences

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