Christoph Flamm
Vienna, AustriaResearch field: Biological Sciences - Bioinformatics
discrete energy landscapes
RNA folding kinetics
design of multi-stable RNA molecules
graph grammars
algebraic chemistry models
evolution of catalysed reaction networks
Publications
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Journal Article (32)
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Christoph Flamm, Alexander Ullrich, Heinz Ekker et al. (2010) Evolution of metabolic networks : a computational frame-work, 1-14. In Journal of Systems Chemistry 1 (4).Download PDF (974.07 KB)
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Gil Benkö, Florian Centler, Peter Dittrich et al. (2009) A topological approach to chemical organizations., 71-88. In Artificial life 15 (1).Download PDF (539.79 KB)
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Heinz W Engl, Christoph Flamm, Philipp Kügler et al. (2009) Inverse problems in systems biology, 123014. In Inverse Problems 25 (12).Download PDF (3.34 MB)
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Ivo L Hofacker, Christoph Flamm (2008) Beyond energy minimization: approaches to the kinetic folding of RNA, 447-457. In Monatshefte für Chemie - Chemical Monthly 139 (4).Download PDF (184.68 KB)
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Christoph Flamm, Ivo L. Hofacker (2008) Beyond energy minimization: approaches to the kinetic folding of RNA, 447-457. In Monatshefte für Chemie - Chemical Monthly 139 (4).Download PDF (184.68 KB)
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Michael Geis, Christoph Flamm, Michael T Wolfinger et al. (2008) Folding kinetics of large RNAs., 160-73. In Journal of molecular biology 379 (1).Download PDF (1.3 MB)
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Konstantin Klemm, Christoph Flamm, Peter F Stadler (2008) Funnels in energy landscapes, 387-391. In The European Physical Journal B 63 (3).Download PDF (219.61 KB)
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Andreas W M Dress, Christoph Flamm, Guido Fritzsch et al. (2008) Noisy: identification of problematic columns in multiple sequence alignments., 7. In Algorithms for molecular biology : AMB.Download PDF (342.27 KB)
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Christoph Flamm, Lukas Endler, Stefan Müller et al. (2007) A minimal and self-consistent in silico cell model based on macromolecular interactions., 1831-9. In Philosophical transactions of the Royal Society of London. Series B, Biological sciences 362 (1486).Download PDF (408.04 KB)
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Ewan Birney, John A Stamatoyannopoulos, Anindya Dutta et al. (2007) Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project., 799-816. In Nature 447 (7146).Download PDF (4.47 MB)
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Book (4)
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Alexander Ullrich, Christoph Flamm (2008) Functional Evolution of Ribozyme-Catalyzed Metabolisms in a Graph-Based Toy-Universe, 28-43. In Springer-Verlag.Download PDF (1.33 MB)
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Christoph Flamm, Ivo L Hofacker, Peter F Stadler (2007) Saddles and Barrier in Landscapes of Generalized Search Operators, 194-212. In Springer-Verlag.Download PDF (342.63 KB)
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Sebastian Pötzsch, Gerik Scheuermann, Michael T Wolfinger et al. (2006) Visualization of Lattice-Based Protein Folding Simulations, 2-7. In IEEE.Download PDF (584.75 KB)
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Peter F Stadler, Camille Stephan-Otto Attolini, Christoph Flamm (2005) CelloS: a Multi-level Approach to Evolutionary Dynamics, 500-509. In Springer-Verlag.Download PDF (1.05 MB)
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Conference Proceedings (4)
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Christoph Flamm, Ivo Hofacker, Bärbel Stadler et al. (2007) Saddles and Barrier in Landscapes of Generalized Search Operators, 194-212. In Foundations of Genetic Algorithms.Download PDF (342.63 KB)
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Gil Benkö, Christoph Flamm, Peter F. Stadler (2005) Explicit Collision Simulation of Chemical Reactions in a Graph Based Artificial Chemistry, 725-733. In Advances in Artificial Life.Download PDF (410.11 KB)
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Gil Benkö, Christoph Flamm, Peter F. Stadler (2003) Generic Properties of Chemical Networks: Artificial Chemistry Based on Graph Rewriting, 10-19. In Advances in Artificial Life.Download PDF (247.33 KB)
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Jan Cupal, Christoph Flamm, Alexander Renner et al. (1997) Density of states, metastable states, and saddle points exploring the energy landscape of an RNA molecule., 88-91. In Proceedings of the 5th International Conference on Intelligent Systems for Molecular Biology.Download PDF (383.75 KB)
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Biographical Information
No biographical information added yet.
CV
Professional Experience
2006 - Present
Aug 2005 - Jul 2006
Research Assistant at Institute of Computer Science (Bioinformatics) / University of Leipzig
Leipzig, Germany
Leipzig, Germany
Apr 1998 - Jul 2005
Assistant Professor at Institute for Theoretical Chemistry and Structural Biology / University of Vienna
Vienna, Austria
Vienna, Austria
Feb 1990 - Feb 1992
Working Student at Research Institute Sandoz GmbH
Vienna, Austria
Vienna, Austria
Education
Oct 1996 - Sep 1998
Theoretical Chemistry / University of Vienna
in Vienna, Austria
Dr rer nat
Dr rer nat
Oct 1987 - Jan 1996
Organic Chemistry / University of Vienna
in Vienna, Austria
Mag rer nat
Mag rer nat
Oct 1977 - Jun 1986
Higher School / BG IX
in Vienna, Austria
Sep 1973 - Jun 1977
Elementary School / Öffentliche Volksschule Währing
in Vienna, Austria
Contact Information
| Webpage: | http://www.tbi.univie.ac.at/~xtof |
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