Dr Colin Gillespie's Publications

Peter Milner, Colin S. Gillespie, Darren J. Wilkinson (2012) Moment closure based parameter inference of stochastic kinetic models. In Statistics and Computing.

C S Gillespie (2012) Stochastic simulation of chemically reacting systems using multi-core processors, 014101. In The Journal of Chemical Physics 136 (1).

S Pohl, W Y Tu, P D Aldridge, C S Gillespie, H Hahne, U Mäder, T D Read, C R Harwood (2011) Combined proteomic and transcriptomic analysis of the response of Bacillus anthracis to oxidative stress., 3036-55. In Proteomics 11 (15).

P Milner, C S Gillespie, D J Wilkinson (2011) Moment closure approximations for stochastic kinetic models with rational rate laws., 99-104. In Mathematical Biosciences.

G Caldwell, S Fitzer, C Gillespie, G Pickavance, E Turnbull, M Bentley (2011) Ocean acidification takes sperm back in time, 1-5. In Invertebrate Reproduction & Development.

R Wockenforth, C S Gillespie, B Jaffray (2011) Survival of children following Nissen fundoplication., 680-5. In The British journal of surgery 98 (5).

G M Dall'Olio, J Marino, M Schubert, K L Keys, M I Stefan, C S Gillespie, P Poulain, K Shameer, R Sugar, B M Invergo, L J Jensen, J Bertranpetit, H Laayouni (2011) Ten Simple Rules for Getting Help from Online Scientific Communities, e1002202. In PLoS Computational Biology 7 (9).

C S Gillespie, G Lei, R J Boys, A J Greenall, D J Wilkinson (2010) Analysing time course microarray data using Bioconductor: a case study using yeast2 Affymetrix arrays, 81. In BMC Research Notes 3 (1).

C S Gillespie, A Golightly (2010) Bayesian inference for generalized stochastic population growth models with application to aphids, 1-17. In Journal of the Royal Statistical Society, C 59 (3).

Y Chen, C Lawless, C S Gillespie, J Wu, R J Boys, D J Wilkinson (2010) CaliBayes and BASIS: integrated tools for the calibration, simulation and storage of biological simulation models. In Briefings in bioinformatics.

C S Gillespie (2009) Moment-closure approximations for mass-action models., 52-8. In IET Systems Biology 3 (1).

M Hong, K R Ryan, P D Arkwright, A R Gennery, C Costigan, M Dominguez, D W Denning, V McConnell, A J Cant, M Abinun, G P Spickett, D C Swan, C S Gillespie, D A Young, D Lilic (2009) Pattern recognition receptor expression is not impaired in patients with chronic mucocutanous candidiasis with or without autoimmune polyendocrinopathy candidiasis ectodermal dystrophy., 40-51. In Clinical and experimental immunology 156 (1).

C S Gillespie, E Renshaw (2008) The evolution of a single-paired immigration death process, 355002. In Journal of Physics A: Mathematical and Theoretical 41 (35).

T W Evans, C S Gillespie, D J Wilkinson (2008) The SBML discrete stochastic models test suite., 285-6. In Bioinformatics (Oxford, England) 24 (2).

E Renshaw, C S Gillespie (2007) An improved saddlepoint approximation., 359-74. In Mathematical biosciences 208 (2).

C J Proctor, D A Lydall, R J Boys, C S Gillespie, D P Shanley, D J Wilkinson, T B L Kirkwood (2007) Modelling the checkpoint response to telomere uncapping in budding yeast., 73-90. In Journal of the Royal Society, Interface / the Royal Society 4 (12).

S Lawson, C S Gillespie (2007) Three dimensional customistaion: effect of statisical techniques on HJC prediction equations in children, S321-S321. In Journal of Biomechanics.

C S Gillespie, D J Wilkinson, D P Shanley, C J Proctor, R J Boys, T B L Kirkwood (2006) BASIS: an internet resource for network modelling. In Journal of Integrative Bioinformatics.

C S Gillespie, D J Wilkinson, C J Proctor, D P Shanley, R J Boys, T B L Kirkwood (2006) Tools for the SBML Community., 628-9. In Bioinformatics (Oxford, England) 22 (5).

C J Proctor, C Soti, R J Boys, C S Gillespie, D P Shanley, D J Wilkinson, T B L Kirkwood (2005) Modelling the actions of chaperones and their role in ageing., 119-31. In Mechanisms of Ageing and Development 126 (1).

C S Gillespie, E Renshaw (2005) The evolution of a batch-immigration death process subject to counts, 1563-1581. In Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences 461 (2057).

C S Gillespie, C J Proctor, R J Boys, D P Shanley, D J Wilkinson, T B L Kirkwood (2004) A mathematical model of ageing in yeast., 189-96. In Journal of theoretical biology 229 (2).

T B L Kirkwood, R J Boys, C S Gillespie, C J Proctor, D P Shanley, D J Wilkinson (2003) Towards an e-biology of ageing: integrating theory and data., 243-9. In Nature reviews. Molecular cell biology 4 (3).

B Kenny, S Quitard, C S Gillespie, N Garmy, P Dean An unprecedented level of interplay between a subset of E.coli-injected effector proteins underpin diarrheal-related responses. In in submission.

A Golightly, C S Gillespie Bayesian Inference for Hybrid Discrete-Continuous Systems Biology Models. In in submission.

G Lei, R J Boys, C S Gillespie, A J Greenall, D J Wilkinson Bayesian inference for sparse VAR(1) models, with application to time course microarray data. In in submission.