Shaun Mahony
Postdoctoral Research Associate, Massachusetts Insitute of TechnologyCambridge, Massachusetts, United States
Research field: Biological Sciences - Bioinformatics
transcriptional regulation
chip-seq
Publications
-
Journal Article (12)
-
Obi L. Griffith, Stephen B. Montgomery, Bridget Bernier et al. (2008) ORegAnno: an open-access community-driven resource for regulatory annotation., D107-13. In Nucleic acids research 36 (Database issue).Download PDF (2.86 MB)
-
Yong Lu, Shaun Mahony, Panayiotis Benos et al. (2007) Combined analysis reveals a core set of cycling genes., R146. In Genome biology 8 (7).Download PDF (448.08 KB)
-
Shaun Mahony, Philip E Auron, Panayiotis V Benos (2007) DNA Familial Binding Profiles Made Easy: Comparison of Various Motif Alignment and Clustering Strategies, e61. In PLoS Comput Biol 3 (3).http://www.ploscompbiol.org/article/i...
http://www.ploscompbiol.org/article/f...
http://dx.plos.org/10.1371/journal.pc...
Download PDF (995.9 KB)Download HTML (153.35 KB) -
Tarjei S Mikkelsen, Matthew J Wakefield, Bronwen Aken et al. (2007) Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences., 167-77. In Nature 447 (7141).
-
Shaun. Mahony, P.E. Auron, P.V. Benos (2007) Inferring protein DNA dependencies using motif alignments and mutual information, i297. In Bioinformatics 23 (13).Download PDF (853.98 KB)Download HTML (113.33 KB)
-
Shaun Mahony, Panayiotis V Benos, Eleanor Feingold et al. (2007) Regulatory conservation of protein coding and microRNA genes in vertebrates: lessons from the opossum genome, R84. In Genome Biol 8 (5).Download PDF (554.35 KB)
-
Shaun. Mahony, P.V. Benos (2007) STAMP: a web tool for exploring DNA-binding motif similarities, W253-258. In Nucleic acids research 35 (suppl_2).Download HTML (107.66 KB)Download PDF (2.1 MB)
-
Katherine Belov, Janine E Deakin, Anthony T Papenfuss et al. (2006) Reconstructing an ancestral mammalian immune supercomplex from a marsupial major histocompatibility complex., e46. In PLoS biology 4 (3).Download PDF (627.8 KB)
-
Shaun Mahony, Panayiotis V Benos, Aaron Golden et al. (2006) Self-organizing neural networks to support the discovery of DNA-binding motifs, 950–62. In Neural networks : the official journal of the International Neural Network Society 19 (6-7).Download PDF (1.07 MB)
-
Shaun Mahony, Panayiotis V Benos, Aaron Golden et al. (2005) Improved detection of DNA motifs using a self-organized clustering of familial binding profiles, i283–91. In Bioinformatics.Download PDF (258.27 KB)
- See all
-
Biographical Information
No biographical information added yet.
CV
Professional Experience
2007 - Present
Postdoctoral Research Associate at Massachusetts Insitute of Technology
Cambridge, Massachusetts, United States
Cambridge, Massachusetts, United States
Jan 2006 - Aug 2007
Postdoctoral Research Associate at University of Pittsburgh
Pittsburgh, Pennsylvania, United States
Pittsburgh, Pennsylvania, United States
Education
Sep 2002 - Jan 2006
National University of Ireland, Galway
in Galway, Ireland
Ph.D.
Ph.D.
Sep 1998 - May 2002
National University of Ireland, Galway
in Galway, Ireland
B.E.
B.E.
Publication Statistics
Graphed by cumulative total
Graphed by month
Graphed by day
Graphed by day
Data temporarily unavailable.
Not enough data available.
Public Groups
Public groups Shaun is a member of
- Not a member of any groups yet.
Public groups Shaun is following
- Not following any groups yet.
- Find new public groups.
Destinations
Sign up today - FREE
Mendeley saves you time finding and organizing research. Learn more