SOMnmR: An R Package for Analyzing CP MAS 13C NMR Spectra of Environmental Samples

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Abstract

Cross-polarization (CP) magic angle spinning (MAS) 13C NMR spectroscopy is a versatile tool for studying organic matter (OM) in soils. Despite its versatility, the extensive post-processing required—including spinning-sidebands (SSB) correction and integration—limits its broader use. We present a new open-source R package, “SOMnmR” (accessible on CRAN and GitHub), designed to quickly process a large number of spectra, correcting for SSBs if required. The package computes the relative abundance of functional groups and can also model organic matter composition using end-member compounds. We describe the package's installation and functionalities and provide examples that (a) compare the results of two different spectrometers and (b) model the results of a large CP MAS 13C NMR data set. Overall, the presented package is a valuable tool for the fast analysis of 13C NMR data sets.

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Colocho Hurtarte, L. C., Garcia-Franco, N., Villalba Ayala, G., Prietzel, J., & Koegel-Knabner, I. (2025). SOMnmR: An R Package for Analyzing CP MAS 13C NMR Spectra of Environmental Samples. Journal of Geophysical Research: Biogeosciences, 130(2). https://doi.org/10.1029/2024JG008288

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