How Bacteria Stopped Worrying and Learned to Love…Formaldehyde

Abstract

Poring over the vast amount of sequence and genetic information now available for many organisms, scientists frequently encounter what appear to be redundant biochemical pathways. Redundant pathways take the same starting material and transform it into the same product, but through different routes. Why should cells maintain redundant pathways? An interesting case is that of Methylobacterium extorquens, a bacterium that can grow on organic molecules with a single carbon atom such as the alcohol methanol. Bacteria in this species first oxidize methanol into formaldehyde, then use formaldehyde to make serine—the entry point for the synthesis of many of the cell's building blocks—via two apparently redundant pathways. The short pathway is a direct (non-enzymatic) reaction of formaldehyde with tetrahydrofolate to make methylene-tetrahydrofolate, which donates a single carbon atom for serine synthesis. A hypothesized long pathway could also lead to methylene-tetrahydrofolate through a long series of enzymatic reactions, one of which consumes energy. Christopher Marx and colleagues now demonstrate that the bacteria modulate their use of each pathway during the course of acclimation to growth on methanol. In the process the authors offer new insights into the bacteria's rapid disposal of formaldehyde, a toxic chemical that would pickle cells in a minute if it was allowed to accumulate.​accumulate.