The ProDom database of protein domain families: More emphasis on 3D

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Abstract

ProDom is a comprehensive database of protein domain families generated from the global comparison of all available protein sequences. Recent improvements include the use of three-dimensional (3D) information from the SCOP database; a completely redesigned web interface (http://www. toulouse.inra.fr/prodom.html); visualization of ProDom domains on 3D structures; coupling of ProDom analysis with the Geno3D homology modelling server; Bayesian inference of evolutionary scenarios for ProDom families. In addition, we have developed ProDom-SG, a ProDom-based server dedicated to the selection of candidate proteins for structural genomics. © Oxford University Press 2005; all rights reserved.

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Bru, C., Courcelle, E., Carrère, S., Beausse, Y., Dalmar, S., & Kahn, D. (2005). The ProDom database of protein domain families: More emphasis on 3D. Nucleic Acids Research, 33(DATABASE ISS.). https://doi.org/10.1093/nar/gki034

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