ProstateZones – Segmentations of the prostatic zones and urethra for the PROSTATEx dataset

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Abstract

Manual segmentations are considered the gold standard for ground truth in machine learning applications. Such tasks are tedious and time-consuming, albeit necessary to train reliable models. In this work, we present a dataset with expert segmentations of the prostatic zones and urethra for 200 randomly selected patients from the PROSTATEx dataset. Notably, independent duplicate segmentations were performed for 40 patients, providing inter-reader variability data. This results in a total of 240 segmentations. This dataset can be used to train machine learning models or serve as an external test set for evaluating models trained on private data, thereby addressing a current gap in the field. The delineated structures and terminology adhere to the latest Prostate Imaging Reporting and Data Systems v2.1 guidelines, ensuring consistency.

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Holmlund, W., Simkó, A., Söderkvist, K., Palásti, P., Tótin, S., Kalmár, K., … Nyholm, T. (2024). ProstateZones – Segmentations of the prostatic zones and urethra for the PROSTATEx dataset. Scientific Data, 11(1). https://doi.org/10.1038/s41597-024-03945-2

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