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Alexie Papanicolaou

  • PhD
  • Lecturer in Bioinformatics
  • University of Western Sydney Hawkesbury Institute for the Environment
  • 13

    h-index

    Impact measure calculated by Scopus using these publications and citation counts.
  • 1784

    Citations

    Number of citations received by these publications in Scopus.

Other IDs

Scopus

Research interests

Informatics databases genetics ecology & evolution functional genomics insects non-model species

About

I work on the (bio)informatics of resource-poor model species, mostly... learn more at http://stressedfruitfly.com

Co-authors (410)

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Publications

Identification of interleukin genes in Pogona vitticeps using a de novo transcriptome assembly from RNA-seq data

  • Livernois A
  • Hardy K
  • Domaschenz R
  • Papanicolaou A
  • Georges A
  • Sarre S
  • Rao S
  • Ezaz T
  • Deakin J
Immunogenetics (2016)
  • --

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Multifaceted biological insights from a draft genome sequence of the tobacco hornworm moth, Manduca sexta

  • Kanost M
  • Arrese E
  • Cao X
  • Chen Y
  • Chellapilla S
  • Goldsmith M
  • Grosse-Wilde E
  • Heckel D
  • Herndon N
  • Jiang H
  • Papanicolaou A
  • Qu J
  • Soulages J
  • Vogel H
  • Walters J
  • Waterhouse R
  • Ahn S
  • Almeida F
  • An C
  • Aqrawi P
  • Bretschneider A
  • Bryant W
  • Bucks S
  • Chao H
  • Chevignon G
  • Christen J
  • Clarke D
  • Dittmer N
  • Ferguson L
  • Garavelou S
  • Gordon K
  • Gunaratna R
  • Han Y
  • Hauser F
  • He Y
  • Heidel-Fischer H
  • Hirsh A
  • Hu Y
  • Jiang H
  • Kalra D
  • Klinner C
  • König C
  • Kovar C
  • Kroll A
  • Kuwar S
  • Lee S
  • Lehman R
  • Li K
  • Li Z
  • Liang H
  • Lovelace S
  • Lu Z
  • Mansfield J
  • McCulloch K
  • Mathew T
  • Morton B
  • Muzny D
  • Neunemann D
  • Ongeri F
  • Pauchet Y
  • Pu L
  • Pyrousis I
  • Rao X
  • Redding A
  • Roesel C
  • Sanchez-Gracia A
  • Schaack S
  • Shukla A
  • Tetreau G
  • Wang Y
  • Xiong G
  • Traut W
  • Walsh T
  • Worley K
  • Wu D
  • Wu W
  • Wu Y
  • Zhang X
  • Zou Z
  • Zucker H
  • Briscoe A
  • Burmester T
  • Clem R
  • Feyereisen R
  • Grimmelikhuijzen C
  • Hamodrakas S
  • Hansson B
  • Huguet E
  • Jermiin L
  • Lan Q
  • Lehman H
  • Lorenzen M
  • Merzendorfer H
  • Michalopoulos I
  • Morton D
  • Muthukrishnan S
  • Oakeshott J
  • Palmer W
  • Park Y
  • Passarelli A
  • Rozas J
  • Schwartz L
  • Smith W
  • Southgate A
  • Vilcinskas A
  • Vogt R
  • Wang P
  • Werren J
  • Yu X
  • Zhou J
  • Brown S
  • Scherer S
  • Richards S
  • Blissard G
Insect Biochemistry and Molecular Biology (2016)
  • --

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The whole genome sequence of the Mediterranean fruit fly, Ceratitis capitata (Wiedemann), reveals insights into the biology and adaptive evolution of a highly invasive pest species

  • Papanicolaou A
  • Schetelig M
  • Arensburger P
  • Atkinson P
  • Benoit J
  • Bourtzis K
  • Castañera P
  • Cavanaugh J
  • Chao H
  • Childers C
  • Curril I
  • Dinh H
  • Doddapaneni H
  • Dolan A
  • Dugan S
  • Friedrich M
  • Gasperi G
  • Geib S
  • Georgakilas G
  • Gibbs R
  • Giers S
  • Gomulski L
  • González-Guzmán M
  • Guillem-Amat A
  • Han Y
  • Hatzigeorgiou A
  • Hernández-Crespo P
  • Hughes D
  • Jones J
  • Karagkouni D
  • Koskinioti P
  • Lee S
  • Malacrida A
  • Manni M
  • Mathiopoulos K
  • Meccariello A
  • Murali S
  • Murphy T
  • Muzny D
  • Oberhofer G
  • Ortego F
  • Paraskevopoulou M
  • Poelchau M
  • Qu J
  • Reczko M
  • Robertson H
  • Rosendale A
  • Rosselot A
  • Saccone G
  • Salvemini M
  • Savini G
  • Schreiner P
  • Scolari F
  • Siciliano P
  • Sim S
  • Tsiamis G
  • Ureña E
  • Vlachos I
  • Werren J
  • Wimmer E
  • Worley K
  • Zacharopoulou A
  • Richards S
  • Handler A
Genome Biology (2016)
  • --

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Transcriptome Analysis of the Sydney Rock Oyster, Saccostrea glomerata: Insights into Molluscan Immunity

  • Ertl N
  • O’Connor W
  • Papanicolaou A
  • Wiegand A
  • Elizur A
PLOS ONE (2016)
  • --

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    Readers not available. This publication is not currently accessible in the Mendeley catalog.
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Identification of Putative Nuclear Receptors and Steroidogenic Enzymes in Murray-Darling Rainbowfish (Melanotaenia fluviatilis) Using RNA-Seq and De Novo Transcriptome Assembly

  • Bain P
  • Papanicolaou A
  • Kumar A
PLOS ONE (2015)
  • --

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Professional experience

Lecturer in Bioinformatics

University of Western Sydney Hawkesbury Institute for the Environment

January 2015 - Present

OCE PostDoctoral Fellow

CSIRO Black Mountain Laboratories

July 2010 - January 2015 (5 years)

Research Associate

University of Exeter

November 2008 - May 2010 (2 years)

Research Assistant

University of Edinburgh

June 2005 - October 2005 (4 months)

Education history

Max-Planck-Institute for Chemical Ecology

Ph.D.

January 2006 - December 2010 (5 years)

University of Edinburgh

MRes Evolutionary Genetics

October 2004 - October 2005 (a year)

University of Edinburgh

BSc Genetics

September 2000 - June 2003 (3 years)