Eric Talevich PhD Bioinformatics

Postdoctoral Scholar

University of California, San Francisco

Location
San Francisco, California, United States
Discipline
Agricultural and Biological Sciences
Interests
Evolution; protein kinases; protein phosphorylation networks; eukaryotic pathogens; cancer; melanoma
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About

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Publications

Activating MET kinase rearrangements in melanoma and Spitz tumours

Yeh I, Botton T, Talevich E, Shain a, Sparatta A, de la Fouchardiere A et al.

Nature Communications (2015)

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ProKinO: A Unified Resource for Mining the Cancer Kinome

McSkimming D, Dastgheib S, Talevich E, Narayanan A, Katiyar S, Taylor S et al.

Human Mutation (2015)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

CNVkit: Copy number detection and visualization for targeted sequencing using off-target reads

Talevich E, Shain A, Botton T, Bastian B

bioRxiv (2014)

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Prediction and Prioritization of Rare Oncogenic Mutations in the Cancer Kinome Using Novel Features and Multiple Classifiers

U M, Talevich E, Katiyar S, Rasheed K, Kannan N

PLoS Computational Biology (2014)

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Computational characterization of protein kinase adaptations in eukaryotic pathogens

Talevich E

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Computational analysis of apicomplexan kinomes

Talevich E, Kannan N, Miranda-Saavedra D

Protein Phosphorylation in Parasites (2013)

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Global Analysis of Protein Expression and Phosphorylation of Three Stages of Plasmodium falciparum Intraerythrocytic Development.

Pease B, Huttlin E, Jedrychowski M, Talevich E, Harmon J, Dillman T et al.

Journal of proteome research (2013)

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Structural and evolutionary adaptation of rhoptry kinases and pseudokinases, a family of coccidian virulence factors

Talevich E, Kannan N

BMC Evolutionary Biology (2013)

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Bio.Phylo: a unified toolkit for processing, analyzing and visualizing phylogenetic trees in Biopython.

Talevich E, Invergo B, Cock P, Chapman B

BMC Bioinformatics (2012)

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An evolutionary perspective on the kinome of malaria parasites.

Talevich E, Tobin A, Kannan N, Doerig C

Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences (2012)

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Structural and evolutionary divergence of eukaryotic protein kinases in Apicomplexa.

Talevich E, Mirza A, Kannan N

BMC Evolutionary Biology (2011)

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Biopython Tutorial and Cookbook

Chang J, Chapman B, Friedberg I, Hamelryck T, Hoon M, Cock P et al.

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Co-conserved features associated with cis regulation of ErbB tyrosine kinases.

Mirza A, Mustafa M, Talevich E, Kannan N

PLoS One (2010)

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Professional experience

Postdoctoral Scholar

University of California, San Francisco

July 2013 - Present

Graduate research assistant

University of Georgia

September 2008 - June 2013 (4 years 9 months)

CTP Engineer

MacDermid LLC

August 2007 - July 2008 (11 months)

Engineer 1

Biosensors International

November 2005 - August 2007 (1 year 9 months)

Education history

University of Georgia

Ph.D. Bioinformatics

August 2008 - June 2013 (4 years 10 months)

UC Davis

B.S. Applied Mathematics

September 2000 - June 2005 (4 years 9 months)