Jason Stajich

  • PhD
  • Professor > Associate Professor
  • Assistant Professor
  • University of California Riverside
  • Agricultural and Biological Sciences

Research Interests

Fungal evolutionary genomics

Followers (54)

  • Christopher Schadt

    Christopher Schadt Oak Ridge National Laboratory

  • Bridget Barker

    Bridget Barker The Translational Genomics Research Institute (TGen)

  • Niklaus Grunwald

    Niklaus Grunwald

  • Rosie Alegado

    Rosie Alegado SOEST, University of Hawaii Manoa

  • Paul Gagniuc

    Paul Gagniuc

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Following (45)

  • Divya Sain

    Divya Sain

  • Hugo Mélida

    Hugo Mélida

  • Carl Zimmer

    Carl Zimmer

  • Banoo Malik

    Banoo Malik Dalhousie University

  • Holly Bik

    Holly Bik University of Birmingham, Birmingham, UK

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Publications

FungiDB: an integrated functional genomics database for fungi.

Stajich J, Harris T, Brunk B, Brestelli J, Fischer S, Harb O, et al.

Nucleic acids research (2011)

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Genome variation in Cryptococcus gattii, an emerging pathogen of immunocompetent hosts.

D'Souza C, Kronstad J, Taylor G, Warren R, Yuen M, Hu G, et al.

mBio (2011)

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Genomic Transition to Pathogenicity in Chytrid Fungi

Joneson S, Stajich J, Shiu S, Rosenblum E

PLoS Pathogens (2011)

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Massive changes in genome architecture accompany the transition to self-fertility in the filamentous fungus Neurospora tetrasperma.

Ellison C, Stajich J, Jacobson D, Natvig D, Lapidus A, Foster B, et al.

Genetics (2011)

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A molecular perspective: biology of the emerging pathogen Batrachochytrium dendrobatidis.

Rosenblum E, Fisher M, James T, Stajich J, Longcore J, Gentry L, et al.

Diseases of aquatic organisms (2010)

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Analysis of the Basidiomycete Coprinopsis cinerea reveals conservation of the core meiotic expression program over half a billion years of evolution.

Burns C, Stajich J, Rechtsteiner A, Casselton L, Hanlon S, Wilke S, et al.

PLoS genetics (2010)

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Conflict between reproductive gene trees and species phylogeny among heterothallic and pseudohomothallic members of the filamentous ascomycete genus Neurospora.

Strandberg R, Nygren K, Menkis A, James T, Wik L, Stajich J, et al.

Fungal genetics and biology (2010)

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Genome sequence of the model mushroom Schizophyllum commune.

Ohm R, de Jong J, Lugones L, Aerts A, Kothe E, Stajich J, et al.

Nature biotechnology (2010)

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Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire.

Lévesque C, Brouwer H, Cano L, Hamilton J, Holt C, Huitema E, et al.

Genome biology (2010)

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Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus).

Stajich J, Wilke S, Ahrén D, Au C, Birren B, Borodovsky M, et al.

Proceedings of the National Academy of Sciences of the United States of America (2010)

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Transcription factors in light and circadian clock signaling networks revealed by genome-wide mapping of direct targets for Neurospora WHITE COLLAR COMPLEX.

Smith K, Sancar G, Dekhang R, Sullivan C, Li S, Tag A, et al.

Eukaryotic cell (2010)

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The fungi.

Stajich J, Berbee M, Blackwell M, Hibbett D, James T, Spatafora J, et al.

Current biology : CB (2009)

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Global gene expression profiles for life stages of the deadly amphibian pathogen Batrachochytrium dendrobatidis.

Rosenblum E, Stajich J, Maddox N, Eisen M

Proceedings of the National Academy of Sciences of the United States of America (2008)

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Resolving arthropod phylogeny: exploring phylogenetic signal within 41 kb of protein-coding nuclear gene sequence.

Regier J, Shultz J, Ganley A, Hussey A, Shi D, Ball B, et al.

Systematic biology (2008)

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BASC: an integrated bioinformatics system for Brassica research.

Erwin T, Jewell E, Love C, Lim G, Li X, Chapman R, et al.

Nucleic acids research (2007)

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Professional experience

Assistant Professor

University of California Riverside

August 2009 - Present

Miller Postdoctoral Fellow

University of California Berkeley

August 2006 - July 2009 (2 years 11 months)

Education history

Duke University

PhD

May 2006 - Present