Ruslan Kalendar

Discipline
Biological Sciences

Publications

The New Wheat Vernalization Response Allele Vrn-D1s is Caused by DNA Transposon Insertion in the First Intron

Muterko A, Balashova I, Cockram J, Kalendar R, Sivolap Y

Plant Molecular Biology Reporter (2015)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

FastPCR Software for PCR, In Silico PCR, and Oligonucleotide Assembly and Analysis.

Kalendar R, Lee D, Schulman A

Methods in molecular biology (Clifton, N.J.) (2014)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Efficiency of different PCR-based marker systems for assessment of Iris pumila genetic diversity

Bublyk O, Andreev I, Kalendar R, Spiridonova K, Kunakh V

Biologia (2013)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Transposon-Based Tagging: IRAP, REMAP, and iPBS.

Kalendar R, Schulman A

Methods in molecular biology (Clifton, N.J.) (2014)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

PCR reaction setup calculators: PCR and qPCR reaction setup calculator; tool for planning PCR and qPCR reactions, mixing solutions.

Ruslan K

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

PrimersList: Analyzes different features of multiple primers simultaneously, the melting temperature calculation for standard and degenerate oligonucleotides, GC content, primer PCR efficiency, sequence linguistic complexity, molecular weight, the extict

Ruslan K

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

PrimerAnalyser: provides comprehensive analysis of sequence with standard and mixed bases, as well as DNA, RNA, methylated, locked and phosphorothioated bases; tool will calculate the physical properties of the sequence including length, CG content, melti

Ruslan K

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Java web tools for PCR, in silico PCR, and oligonucleotide assembly and analysis.

Kalendar R, Lee D, Schulman A

Genomics (2011)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Genetic diversity of cultivated flax (Linum usitatissimum L.) germplasm assessed by retrotransposon-based markers.

Smýkal P, Bačová-Kerteszová N, Kalendar R, Corander J, Schulman A, Pavelek M

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik (2011)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Diversity of Long Terminal Repeat Retrotransposon Genome Distribution in Natural Populations of the Wild Diploid Wheat Aegilops speltoides.

Hosid E, Brodsky L, Kalendar R, Raskina O, Belyayev A

Genetics (2012)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Active retrotransposons are a common feature of grass genomes.

Vicient C, Jääskeläinen M, Kalendar R, Schulman A

Plant physiology (2001)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Retrotransposons and genomic stability in populations of the young allopolyploid species Spartina anglica C.E. Hubbard (Poaceae).

Baumel A, Ainouche M, Kalendar R, Schulman A

Molecular biology and evolution (2002)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Large retrotransposon derivatives: abundant, conserved but nonautonomous retroelements of barley and related genomes.

Kalendar R, Vicient C, Peleg O, Anamthawat-Jonsson K, Bolshoy A, Schulman A

Genetics (2004)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

FastPCR Software for PCR Primer and Probe Design and Repeat Search

Kalendar R, Lee D, Schulman A

Genes, Genomes and Genomics (2009)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

The use of retrotransposon-based molecular markers to analyze genetic diversity

Kalendar R

Ratarstvo i Povrtarstvo (2011)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Structure, functionality, and evolution of the BARE-1 retrotransposon of barley.

Vicient C, Kalendar R, Anamthawat-Jónsson K, Schulman A

Genetica (1999)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

A high-density cytogenetic map of the Aegilops tauschii genome incorporating retrotransposons and defense-related genes: insights into cereal chromosome structure and function.

Boyko E, Kalendar R, Korzun V, Fellers J, Korol A, Schulman A et al.

Plant molecular biology (2002)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Envelope-class retrovirus-like elements are widespread, transcribed and spliced, and insertionally polymorphic in plants.

Vicient C, Kalendar R, Schulman A

Genome research (2001)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

IRAP and REMAP: two new retrotransposon-based DNA fingerprinting techniques

Kalendar R, Grob T, Regina M, Suoniemi A, Schulman A

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik (1999)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Phylogeny and transpositional activity of Ty1-copia group retrotransposons in cereal genomes

Gribbon B, Pearce S, Kalendar R, Schulman A, Paulin L, Jack P et al.

MGG - Molecular and General Genetics (1999)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Retrotransposon BARE-1: expression of encoded proteins and formation of virus-like particles in barley cells

Jaaskelainen M, Mykkanen A, Arna T, Vicient C, Suoniemi A, Kalendar R et al.

The Plant Journal (1999)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Application of BARE-1 retrotransposon markers to the mapping of a major resistance gene for net blotch in barley

Manninen O, Kalendar R, Robinson J, Schulman A

Molecular and General Genetics (2000)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Genome evolution of wild barley (Hordeum spontaneum) by BARE-1 retrotransposon dynamics in response to sharp microclimatic divergence.

Kalendar R, Tanskanen J, Immonen S, Nevo E, Schulman A

Proceedings of the National Academy of Sciences of the United States of America (2000)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Comparison of the utility of barley retrotransposon families for genetic analysis by molecular marker techniques.

Leigh F, Kalendar R, Lea V, Lee D, Donini P, Schulman A

Molecular genetics and genomics : MGG (2003)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

A movable feast: diverse retrotransposons and their contribution to barley genome dynamics.

Schulman A, Kalendar R

Cytogenetic and genome research (2005)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Variability, recombination, and mosaic evolution of the barley BARE-1 retrotransposon.

Vicient C, Kalendar R, Schulman A

Journal of molecular evolution (2005)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

TRIM retrotransposons occur in apple and are polymorphic between varieties but not sports.

Antonius-Klemola K, Kalendar R, Schulman A

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik (2006)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Generation of SNP markers for short straw in oat (Avena sativa L.).

Tanhuanpää P, Kalendar R, Laurila J, Schulman A, Manninen O, Kiviharju E

Genome / National Research Council Canada = Génome / Conseil national de recherches Canada (2006)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

IRAP and REMAP for retrotransposon-based genotyping and fingerprinting.

Kalendar R, Schulman A

Nature protocols (2006)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Mapping of major spot-type and net-type net-blotch resistance genes in the Ethiopian barley line CI 9819.

Manninen O, Jalli M, Kalendar R, Schulman A, Afanasenko O, Robinson J

Genome / National Research Council Canada = Génome / Conseil national de recherches Canada (2006)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

A major gene for grain cadmium accumulation in oat (Avena sativa L.).

Tanhuanpää P, Kalendar R, Schulman A, Kiviharju E

Genome / National Research Council Canada = Génome / Conseil national de recherches Canada (2007)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

The first doubled haploid linkage map for cultivated oat.

Tanhuanpää P, Kalendar R, Schulman A, Kiviharju E

Genome / National Research Council Canada = Génome / Conseil national de recherches Canada (2008)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Reme1, a Copia retrotransposon in melon, is transcriptionally induced by UV light.

Ramallo E, Kalendar R, Schulman A, Martínez-Izquierdo J

Plant molecular biology (2008)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Cassandra retrotransposons carry independently transcribed 5S RNA.

Kalendar R, Tanskanen J, Chang W, Antonius K, Sela H, Peleg O et al.

Proceedings of the National Academy of Sciences of the United States of America (2008)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Evolutionary conserved lineage of Angela-family retrotransposons as a genome-wide microsatellite repeat dispersal agent.

Smýkal P, Kalendar R, Ford R, Macas J, Griga M

Heredity (2009)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Genetic variability in sunflower (Helianthus annuus L.) and in the Helianthus genus as assessed by retrotransposon-based molecular markers.

Vukich M, Schulman A, Giordani T, Natali L, Kalendar R, Cavallini A

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik (2009)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Using IRAP markers for analysis of genetic variability in populations of resource and rare species of plants

Boronnikova S, Kalendar R

Russian Journal of Genetics (2010)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Transposable elements in a marginal plant population: temporal fluctuations provide new insights into genome evolution of wild diploid wheat.

Belyayev A, Kalendar R, Brodsky L, Nevo E, Schulman A, Raskina O

Mobile DNA (2010)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

iPBS: a universal method for DNA fingerprinting and retrotransposon isolation.

Kalendar R, Antonius K, Smýkal P, Schulman A

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik (2010)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Analysis of plant diversity with retrotransposon-based molecular markers.

Kalendar R, Flavell, Andy J, Ellis T, Sjakste T, Moisy C, Schulman, Alan H

Heredity (2011)

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Java web tools for PCR, in silico PCR, and oligonucleotide assembly and analyses

Ruslan K

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

FastPCR software for PCR primer and probe design and repeat search

Kalendar R

  • -- Readers Readers not available. This publication is not currently accessible in the Mendeley catalog.

Professional experience

Senior Research Scientist

Helsingin yliopisto - University of Helsinki

March 2007 - March 2014 (7 years)

Education history

Helsingin yliopisto - University of Helsinki

Adjunct Professor (Docent)

April 2006 - March 2014 (7 years 11 months)