CAVER Analyst 1.0: Graphic tool for interactive visualization and analysis of tunnels and channels in protein structures

  • Kozlikova B
  • Sebestova E
  • Sustr V
 et al. 
  • 62

    Readers

    Mendeley users who have this article in their library.
  • 49

    Citations

    Citations of this article.

Abstract

UNLABELLED: The transport of ligands, ions or solvent molecules into proteins with buried binding sites or through the membrane is enabled by protein tunnels and channels. CAVER Analyst is a software tool for calculation, analysis and real-time visualization of access tunnels and channels in static and dynamic protein structures. It provides an intuitive graphic user interface for setting up the calculation and interactive exploration of identified tunnels/channels and their characteristics. AVAILABILITY AND IMPLEMENTATION: CAVER Analyst is a multi-platform software written in JAVA. Binaries and documentation are freely available for non-commercial use at http://www.caver.cz.

Get free article suggestions today

Mendeley saves you time finding and organizing research

Sign up here
Already have an account ?Sign in

Find this document

Get full text

Authors

  • Lukas DanielInstitute of Applied Biotechnologies

    Follow
  • Artur GoraBiotechnology Centre, Silesian University of Technology

    Follow
  • Barbora Kozlikova

  • Eva Sebestova

  • Vilem Sustr

  • Jan Brezovsky

Cite this document

Choose a citation style from the tabs below

Save time finding and organizing research with Mendeley

Sign up for free