Gene similarity uncovers mutation path - VAST 2010 mini challenge 3 award: Innovative tool adaptation

  • Freire M
  • Sopan A
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Abstract

The VAST 2010 minichallenge 3 dataset scenario contains a set of genetic sequences from a hypothetical disease outbreak. We describe how we used AC, a plagiarism detection tool, to find the gene sequence similarity; and ManyNets, a network analysis tool, to trace back the gene-mutations and identify the characteristics of the sequences. Our analysis won the Innovative Tool Adaptation award. ©2010 IEEE.

Author-supplied keywords

  • Gene mutation
  • H.5.2 [graphical user interface]: visual analytics

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