LibSBML: An API library for SBML

  • Bornstein B
  • Keating S
  • Jouraku A
 et al. 
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Abstract

UNLABELLED LibSBML is an application programming interface library for reading, writing, manipulating and validating content expressed in the Systems Biology Markup Language (SBML) format. It is written in ISO C and C++, provides language bindings for Common Lisp, Java, Python, Perl, MATLAB and Octave, and includes many features that facilitate adoption and use of both SBML and the library. Developers can embed libSBML in their applications, saving themselves the work of implementing their own SBML parsing, manipulation and validation software. AVAILABILITY LibSBML 3 was released in August 2007. Source code, binaries and documentation are freely available under LGPL open-source terms from http://sbml.org/software/libsbml.

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Authors

  • Benjamin J. Bornstein

  • Sarah M. Keating

  • Akiya Jouraku

  • Michael Hucka

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