QuickJoin - Fast neighbour-joining tree reconstruction

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Abstract

Summary: We have built a tool for fast construction of very large phylogenetic trees. The tool uses heuristics for speeding up the neighbour-joining algorithm - while still constructing the same tree as the original neighbour-joining algorithm - making it possible to construct trees for 8000 species in <10 min on a single desktop PC. In comparison, the same task takes more than 30 min using the QuickTree neighbour-joining implementation. © Oxford University Press 2004; all rights reserved.

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APA

Mailund, T., & Pedersen, C. N. S. (2004). QuickJoin - Fast neighbour-joining tree reconstruction. Bioinformatics, 20(17), 3261–3262. https://doi.org/10.1093/bioinformatics/bth359

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