Peroxisome Protein Transportation Affects Metabolism of Branched-Chain Fatty Acids That Critically Impact Growth and Development of C. elegans

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Abstract

The impact of specific lipid molecules, including fatty acid variants, on cellular and developmental regulation is an important research subject that remains under studied. Monomethyl branched-chain fatty acids (mmBCFAs) are commonly present in multiple organisms including mammals, however our understanding of mmBCFA functions is very limited. C. elegans has been the premier model system to study the functions of mmBCFAs and their derived lipids, as mmBCFAs have been shown to play essential roles in post-embryonic development in this organism. To understand more about the metabolism of mmBCFAs in C. elegans, we performed a genetic screen for suppressors of the L1 developmental arrest phenotype caused by mmBCFA depletion. Extensive characterization of one suppressor mutation identified prx-5, which encodes an ortholog of the human receptor for the type-1 peroxisomal targeting signal protein. Our study showed that inactivating prx-5 function compromised the peroxisome protein import, resulting in an increased level of branched-chain fatty acid C17ISO in animals lacking normal mmBCFA synthesis, thereby restoring wild-type growth and development. This work reveals a novel connection between peroxisomal functions and mmBCFA metabolism. © 2013 Wang et al.

Figures

  • Figure 1. The growth defect of elo-5(lf) is suppressed by mutations in prx-5 and prx-6. (A) Structure of mmBCFA C17ISO (15-methyl hexadecanoic acid) and C15ISO (13- methyl tetradecanoic acid). ELO-5 and ELO-6 are responsible for synthesis of C15ISO and C17ISO. (B-E) Microscopic images of C. elegans of indicated genotypes and treatments. Unlike WT (B) elo-5(lf) mutants depleted for mmBCFA after hatching display a robust L1 growth arrest phenotype (indicated by arrows) (C) that can be overcome by dietary supplementation of C17ISO (D). The growth arrest phenotype of elo-5(lf) is suppressed by the ku517 allele (E). (F) Schematic representation of the suppressor screen. The extrachromosomal array is composed of two transgenic markers: GFP and rol-6(dn), but only GFP is shown in the cartoon for simplicity. (G) Bar graph showing percentage of animals that reached adulthood for strains with indicated genotypes. Three loss-of-function (lf) mutations in the prx-5 and prx-6 genes significantly suppressed the L1 arrest phenotype of elo-5(lf).
  • Figure 2. Positional cloning and analysis of prx-5 defined by the ku517 mutation. (A) Schematic representation of 2 centimorgan (cM) region of chromosome II containing the ku517 mutation. The position of ku517 relative to the dpy-10 and unc-4 genes was determined by three-point mapping. The location of a 7 kb genomic DNA clone able to rescue the ku517 allele (3 out of 3 transgenic lines) is also indicated. (B) Structure of the prx-5 gene. There are two potential cDNA isoforms differing by 6 nucleotides (wormbase.org). The C to T substitution in prx-5(ku517) results in a premature stop codon terminating the encoded protein at amino acid residue 475. The double-arrow indicates the 437 bp deletion in prx-5(tm4948) allele. (C-F) Fluorescence images showing the broad expression pattern of a Pprx-5:GFP fusion protein in C. elegans. The GFP reporter was observed in the embryo (C), intestine (D), hypodermis (E) and neurons (F). (G-J) Images showing the distribution of the GFP-SKL reporter that is the readout of peroxisomal import activity [17]. GFP was localized in peroxisomes as indicated by the punctate pattern in both wild type and elo-5(lf) mutants (G and H). In prx-5(tm4948), GFP is dispersed throughout the cytoplasm, indicating a defect in peroxisomal import (I and J). Bars, 25 µm.
  • Figure 3. prx-5(lf) increases mmBCFA C17ISO level in elo-5(lf) mutant and its suppression depends on the elo-6. (A) C17ISO levels in worms of indicated genotypes cultured without mmBCFA supplementation. C17ISO concentration is dramatically decreased in elo-5(lf) animals compared to wild-type worms, and partially recovered in two suppressor mutants prx-5(ku517); elo-5(lf) and prx-5(tm4948); elo-5(lf). Three replicates were done for each sample. Data are presented as average concentration with corresponding standard deviation (s.d.). (B-C) Microscopic images of C. elegans of indicated genotypes and treatments. prx-5(ku517) overcame the L1 arrest of elo-5(lf) (B), but this suppression was reversed when elo-6 was knocked down by RNAi (C). (D) Bar graph showing percentage of animals that reached adulthood for prx-5(ku517); elo-5(lf) with or without elo-6 RNAi.
  • Figure 4. prx-5/6 mutations likely cause a decrease in mmBCFA degradation. (A) qRT-PCR data showing mRNA levels of the elo-6 gene in worms of indicated genotypes. elo-5(lf); Ex[elo-6] is a transgenic strain that significantly overexpressed the elo-6 gene and was not sufficient to suppress the L1 arrest phenotype of elo-5(lf). The data suggest that a higher level of elo-6 expression is not likely the cause of the suppression. (B) qRT-PCR data showing mRNA levels corresponding to several other FA elongation enzymes in worms of indicated genotypes. Since the elo-5 mRNA being measured is from the elo-5(gk208, deletion) allele, the significant decrease in elo-5 mRNA level is likely due to mutation-induced mRNA degradation. (C) Comparison of mmBCFA composition in the indicated strains. Percentage of C15ISO and C17ISO has a statistically significant increase in the maoc-1(lf) mutant.

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Wang, R., Kniazeva, M., & Han, M. (2013). Peroxisome Protein Transportation Affects Metabolism of Branched-Chain Fatty Acids That Critically Impact Growth and Development of C. elegans. PLoS ONE, 8(9). https://doi.org/10.1371/journal.pone.0076270

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