We present the Saccharomyces cerevisiae PeptideAtlas composed from 47 diverse experiments and 4.9 million tandem mass spectra. The observed peptides align to 61% of Saccharomyces Genome Database (SGD) open reading frames (ORFs), 49% of the uncharacterized SGD ORFs, 54% of S. cerevisiae ORFs with a Gene Ontology annotation of 'molecular function unknown', and 76% of ORFs with Gene names. We highlight the use of this resource for data mining, construction of high quality lists for targeted proteomics, validation of proteins, and software development. © 2006 King et al.; licensee BioMed Central Ltd.
CITATION STYLE
King, N. L., Deutsch, E. W., Ranish, J. A., Nesvizhskii, A. I., Eddes, J. S., Mallick, P., … Aebersold, R. (2006). Analysis of the Saccharomyces cerevisiae proteome with PeptideAtlas. Genome Biology, 7(11). https://doi.org/10.1186/gb-2006-7-11-r106
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