Molecular Modeling of the Interaction Between Stem Cell Peptide and Immune Receptor in Plants

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Abstract

Molecular docking enables comprehensive exploration of interactions between chemical moieties and proteins. Modeling and docking approaches are useful to determine the three-dimensional (3D) structure of experimentally uncrystallized proteins and subsequently their interactions with various inhibitors and activators or peptides. Here, we describe a protocol for carrying out molecular modeling and docking of stem cell peptide CLV3p on plant innate immune receptor FLS2.

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Naseem, M., Srivastava, M., Osmanoglu, O., Iqbal, J., Howari, F. M., AlRemeithi, F. A., & Dandekar, T. (2020). Molecular Modeling of the Interaction Between Stem Cell Peptide and Immune Receptor in Plants. In Methods in Molecular Biology (Vol. 2094, pp. 67–77). Humana Press Inc. https://doi.org/10.1007/978-1-0716-0183-9_8

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