Multiple-level MPI file write-back and prefetching for blue gene systems

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Abstract

This paper presents the design and implementation of an asynchronous data-staging strategy for file accesses based on ROMIO, the most popular MPI-IO distribution, and ZeptoOS, an open source operating system solution for Blue Gene systems. We describe and evaluate a two-level file write-back implementation and a one-level prefetching solution. The experimental results demonstrate that both solutions achieve high performance through a high degree of overlap between computation, communication, and file I/O. © 2009 Springer Berlin Heidelberg.

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Blas, J. G., Isailǎ, F., Carretero, J., Latham, R., & Ross, R. (2009). Multiple-level MPI file write-back and prefetching for blue gene systems. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) (Vol. 5759 LNCS, pp. 164–173). Springer Verlag. https://doi.org/10.1007/978-3-642-03770-2_23

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