Abstract
PathJam is a new comprehensive and freely accessible web-server application integrating scattered human pathway annotation from several public sources. The tool has been designed to be intuitive for wet-lab users providing statistical enrichment analysis of pathway annotation for a given gene list of interest. Results are displayed in several interactive and downloadable views (graphs, spread-sheets, etc.) facilitating the biological interpretation of the gene lists. Moreover, PathJam allows users to build their own gene sets files in order to use them in gene set enrichment-based analysis. Finally, a simplified version of PathJam has been also implemented as a widget and is currently available for CARGO users. © 2009 Springer Berlin Heidelberg.
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Glez-Peña, D., Domínguez, R., Gómez-López, G., Pisano, D. G., & Fdez-Riverola, F. (2009). Current efforts to integrate biological pathway information. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) (Vol. 5518 LNCS, pp. 1092–1096). https://doi.org/10.1007/978-3-642-02481-8_165
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