Frequent promoter hypermethylation of the APC and RASSF1A tumour suppressors in parathyroid tumours

57Citations
Citations of this article
38Readers
Mendeley users who have this article in their library.

Abstract

Background: Parathyroid adenomas constitute the most common entity in primary hyperparathyroidism, and although recent advances have been made regarding the underlying genetic cause of these lesions, very little data on epigenetic alterations in this tumour type exists. In this study, we have determined the levels of promoter methylation regarding the four tumour suppressor genes APC, RASSF1A, p16INK4A and RAR-β in parathyroid adenomas. In addition, the levels of global methylation were assessed by analyzing LINE-1 repeats. Methodology/Principal Findings: The sample collection consisted of 55 parathyroid tumours with known HRPT2 and/or MEN1 genotypes. Using Pyrosequencing analysis, we demonstrate APC promoter 1A and RASSF1A promoter hypermethylation in the majority of parathyroid tumours (71% and 98%, respectively). Using TaqMan qRT-PCR, all tumours analyzed displayed lower RASSF1A mRNA expression and higher levels of total APC mRNA than normal parathyroid, the latter of which was largely conferred by augmented APC 1B transcription levels. Hypermethylation of p16INK4A was demonstrated in a single adenoma, whereas RAR-β hypermethylation was not observed in any sample. Moreover, based on LINE-1 analyses, parathyroid tumours exhibited global methylation levels within the range of non-neoplastic parathyroid tissues. Conclusions/Significance: The results demonstrate that APC and RASSF1A promoter hypermethylation are common events in parathyroid tumours. While RASSF1A mRNA levels were found downregulated in all tumours investigated, APC gene expression was retained through APC 1B mRNA levels. These findings suggest the involvement of the Ras signaling pathway in parathyroid tumorigenesis. Additionally, in contrast to most other human cancers, parathyroid tumours were not characterized by global hypomethylation, as parathyroid tumours exhibited LINE-1 methylation levels similar to that of normal parathyroid tissues. © 2010 Juhlin et al.

Figures

  • Figure 1. Examples of Pyrograms for quantification of methylation densities. 10 CpG sites of the APC promoter 1A, 5 CpG sites of the RASSF1A promoter and 7 CpG sites of the p16INK4A promoter are shown for case RAD 13, a tumour carrying a somatic MEN1 mutation. The tumour displays methylation densities of 33.9% at APC (range 16–41%), 58.2% at RASSF1A (range 49–68%) and 1.6% at p16INK4A (range 1–3%), respectively. Nucleotides at position #16 of the APC promoter region 1A and at position #32 of the p16INK4A promoter (yellow) are examples of CpG free cytosine residues which serve as internal controls for satisfactory bisulphite-driven C to T conversion for each DNA sample. doi:10.1371/journal.pone.0009472.g001
  • Table 1. Results from the gene promoter methylation analyses in parathyroid tumours and control tissues.
  • Table 1. Cont.
  • Figure 2. Global and regional hypermethylation in parathyroid tumours. Individual value plot illustrating the mean densities of CpG methylation of the APC, RASSF1A, p16INK4A, RAR-b and LINE-1 promoters for the 55 parathyroid tumours (T) and 3 normal parathyroid controls (N). The Y axis represents the mean density of methylation calculated as an average of the individual CpG residues assayed. doi:10.1371/journal.pone.0009472.g002
  • Table 2. Correlations between hypermethylation levels and tumour characteristics.
  • Table 3. Summary of the parathyroid tumour study group.
  • Figure 3. APC promoter 1A hypermethylation in parathyroid tumours with a coupling to MEN1 mutations. Boxplot displaying APC promoter methylation in comparison to MEN1 genotype for all cases where genotype data was available. The endpoints of the boxes represent the first and third quartiles respectively, and the horizontal line corresponds to the median. High APC promoter methylation density is statistically correlated to MEN1 mutational status. doi:10.1371/journal.pone.0009472.g003
  • Figure 4. Interval plots demonstrating relative RASSF1A and APC gene expression in parathyroid tumours. 16 adenomas were compared to the normal parathyroid mean regarding (A) RASSF1A and (B) total APC and APC 1B gene expression. The endpoints of the intervals represent the 95% confidence interval for the mean, and the diamond corresponds to the mean value. doi:10.1371/journal.pone.0009472.g004

Cited by Powered by Scopus

This article is free to access.

90Citations
52Readers

Register to see more suggestions

Mendeley helps you to discover research relevant for your work.

Already have an account?

Cite

CITATION STYLE

APA

Juhlin, C. C., Kiss, N. B., Villablanca, A., Haglund, F., Nordenström, J., Höög, A., & Larsson, C. (2010). Frequent promoter hypermethylation of the APC and RASSF1A tumour suppressors in parathyroid tumours. PLoS ONE, 5(3). https://doi.org/10.1371/journal.pone.0009472

Readers over time

‘10‘12‘13‘14‘15‘16‘17‘18‘19‘20‘21‘22‘23‘2402468

Readers' Seniority

Tooltip

PhD / Post grad / Masters / Doc 19

68%

Researcher 7

25%

Professor / Associate Prof. 2

7%

Readers' Discipline

Tooltip

Agricultural and Biological Sciences 10

40%

Biochemistry, Genetics and Molecular Bi... 8

32%

Medicine and Dentistry 6

24%

Computer Science 1

4%

Save time finding and organizing research with Mendeley

Sign up for free
0