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Evolving AVX512 Parallel C Code Using GP

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) (2019) 11451 LNCS 245-261
DOI: 10.1007/978-3-030-16670-0_16
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Abstract

Using 512 bit Advanced Vector Extensions, previous development history and Intel documentation, BNF grammar based genetic improvement automatically ports RNAfold to AVX, giving up to a 1.77 fold speed up. The evolved code pull request is an accepted GI software maintenance update to bioinformatics package ViennaRNA.

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Langdon, W. B., & Lorenz, R. (2019). Evolving AVX512 Parallel C Code Using GP. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) (Vol. 11451 LNCS, pp. 245–261). Springer Verlag. https://doi.org/10.1007/978-3-030-16670-0_16

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