The oxDNA Coarse-Grained Model as a Tool to Simulate DNA Origami

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Abstract

This chapter introduces how to run molecular dynamics simulations for DNA origami using the oxDNA coarse-grained model.

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Doye, J. P. K., Fowler, H., Prešern, D., Bohlin, J., Rovigatti, L., Romano, F., … Snodin, B. E. K. (2023). The oxDNA Coarse-Grained Model as a Tool to Simulate DNA Origami. In Methods in Molecular Biology (Vol. 2639, pp. 93–112). Humana Press Inc. https://doi.org/10.1007/978-1-0716-3028-0_6

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