RNA secondary structure is often predicted using folding thermodynamics. RNAstructure is a software package that includes structure prediction by free energy minimization, prediction of base pairing probabilities, prediction of structures composed of highly probably base pairs, and prediction of structures with pseudoknots. A user-friendly graphical user interface is provided, and this interface works on Windows, Apple OS X, and Linux. This chapter provides protocols for using RNAstructure for structure prediction.
CITATION STYLE
Xu, Z. Z., & Mathews, D. H. (2016). Secondary structure prediction of single sequences using RNAstructure. In Methods in Molecular Biology (Vol. 1490, pp. 15–34). Humana Press Inc. https://doi.org/10.1007/978-1-4939-6433-8_2
Mendeley helps you to discover research relevant for your work.