Short communication: Genotype imputation within and across Nordic cattle breeds

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Abstract

This study investigated the accuracies of imputation from 50K genotypes to high-density genotypes for animals from the Danish, Swedish, or Finnish Red dairy cattle populations, using either a national, combined Red, or combined Red and Holstein reference population. Combining the Red populations increased the imputation accuracy for all 3 populations compared with using single-nationality references. Including Holstein animals in the reference further increased the imputation accuracy for Danish Red. © 2012 American Dairy Science Association.

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Brøndum, R. F., Ma, P., Lund, M. S., & Su, G. (2012). Short communication: Genotype imputation within and across Nordic cattle breeds. Journal of Dairy Science, 95(11), 6795–6800. https://doi.org/10.3168/jds.2012-5585

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