Abstract
Pontibacter roseus is a member of genus Pontibacter family Cytophagaceae, class Cytophagia. While the type species of the genus Pontibacter actiniarum was isolated in 2005 from a marine environment, subsequent species of the same genus have been found in different types of habitats ranging from seawater, sediment, desert soil, rhizosphere, contaminated sites, solar saltern and muddy water. Here we describe the features of Pontibacter roseus strain SRC-1T along with its complete genome sequence and annotation from a culture of DSM 17521T. The 4,581,480 bp long draft genome consists of 12 scaffolds with 4,003 protein-coding and 50 RNA genes and is a part of Genomic Encyclopedia of Type Strains: KMG-I project.
Figures
![Figure 1 Neighbour-joining phylogenetic tree based on 16S rRNA gene sequences, showing the relationships of Pontibacter roseus SRC-1T to other published Pontibacter type strains and representative type strains of the family Cytophagaceae with Salinibacter ruber M31 as the outgroup. The neighbor joining [19] tree was constructed using MEGA v5.2.2 [20] based on the p-distance model with bootstrap values >50 (expressed as percentages of 1,000 replicates) shown at branch points. Lineages with type strain genome sequencing projects registered in GOLD [21] are labeled with one asterisk, while those with a published genome sequence is marked with two asterisks [16,22,23].](https://s3-eu-west-1.amazonaws.com/com.mendeley.prod.article-extracted-content/images/67c14c0a-6851-3ee5-9d95-943cd381d517/thumbnail-8306d366-12e7-45b2-bbe5-ffaca5ece9d9-1.png)
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Mukherjee, S., Lapidus, A., Shapiro, N., Cheng, J. F., Han, J., Reddy, T. B. K., … Pati, A. (2015). High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1T(DSM 17521T) isolated from muddy waters of a drainage system in Chandigarh, India. Standards in Genomic Sciences, 10(FEBRUARY2015). https://doi.org/10.1186/1944-3277-10-8
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