The protocol describes a computational method to develop a Single Locus Sequence Typing (SLST) scheme for typing bacterial species. The resulting scheme can be used to type bacterial isolates as well as bacterial species directly from complex communities using next-generation sequencing technologies.
CITATION STYLE
Scholz, C. F. P., & Jensen, A. (2017). Development of a single locus sequence typing (SLST) scheme for typing bacterial species directly from complex communities. In Methods in Molecular Biology (Vol. 1535, pp. 97–107). Humana Press Inc. https://doi.org/10.1007/978-1-4939-6673-8_7
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