BioJS DAGViewer: A reusable JavaScript component for displaying directed graphs

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Abstract

The DAGViewer BioJS component is a reusable JavaScript component made available as part of the BioJS project and intended to be used to display graphs of structured data, with a particular emphasis on Directed Acyclic Graphs (DAGs). It enables users to embed representations of graphs of data, such as ontologies or phylogenetic trees, in hyper-text documents (HTML). This component is generic, since it is capable (given the appropriate configuration) of displaying any kind of data that is organised as a graph. The features of this component which are useful for examining and filtering large and complex graphs are described. Availability: http://github.com/alexkalderimis/dag-viewer-biojs; http://github.com/biojs/biojs; http://dx.doi.org/10.5281/zenodo.8303.

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Micklem, G., Kalderimis, A., Stepan, R., Sullivan, J., Lyne, R., & Lyne, M. (2014). BioJS DAGViewer: A reusable JavaScript component for displaying directed graphs. F1000Research, 3. https://doi.org/10.12688/f1000research.3-51.v1

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