Multiplatform Integrative Analysis of Immunogenomic Data for Biomarker Discovery

Abstract

Genomic platforms are increasingly used to gain an understanding of how the immune system responds to cancer. In this chapter we describe steps applied in immunogenomic processing and data processing from multiple genomics platforms to enable study of immune response and the evaluation of candidate biomarkers. We also describe how publicly available web resources can be used to discover and evaluate candidate cancer immune biomarkers.