Distinctive genetic activity pattern of the human dental pulp between deciduous and permanent teeth

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Abstract

Human deciduous and permanent teeth exhibit different developmental processes, morphologies, histological characteristics and life cycles. In addition, their pulp tissues react differently to external stimuli, such as the pulp sensitivity test, dental trauma and pulp therapy materials. These suggest differences in gene expression and regulation, and in this study we compared gene-expression profiles of the human dental pulp from deciduous and permanent teeth. Pulp tissues from permanent premolars and deciduous molars aged 11-14 years were extirpated and mRNA was isolated for cDNA microarray analysis, and quantitative real-time PCR (qPCR). Other teeth were used for immunohistochemical analysis (IHC). Microarray analysis identified 263 genes with a twofold or greater difference in expression level between the two types of pulp tissue, 43 and 220 of which were more abundant in deciduous and permanent pulp tissues, respectively. qPCR analysis was conducted for eight randomly selected genes, and the findings were consistent with the cDNA microarray results. IHC confirmed that insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1) was broadly expressed in deciduous dental pulp tissue, but minimally expressed in permanent dental pulp tissue. Immunohistochemical analysis showed that calbindin 1 (CALB1), leucine-rich repeat-containing G-protein-coupled receptor 5 (LGR5 ), and gamma-aminobutyric acid A receptor beta 1 (GABRB1) were abundantly expressed in permanent predentin/odontoblasts, but only minimally expressed in deciduous dental pulp tissue. These results show that deciduous and permanent pulp tissues have different characteristics and gene expression, suggesting that they may have different functions and responses to therapies focused on pulp or dentin regeneration. © 2014 Kim et al.

Figures

  • Table 1. Most up-regulated genes in the pulp tissue of deciduous teeth as compared to permanent teeth.
  • Table 2. Most up-regulated genes in the pulp tissue of permanent teeth as compared to deciduous teeth.
  • Figure 1. M-A plot. Expand this figure legend to explain what it means to those who might not be familiar with such a plot. The data of all plots were normally distributed. doi:10.1371/journal.pone.0102893.g001
  • Figure 2. Main categories of genes expressed specifically in deciduous and permanent dental pulp tissues on the basis of their biologic processes (F-statistic p,0.05). doi:10.1371/journal.pone.0102893.g002
  • Figure 3. Main categories of genes expressed specifically in deciduous and permanent dental pulp tissues on the basis of their molecular functions (F-statistic p,0.05). doi:10.1371/journal.pone.0102893.g003
  • Table 3. mRNA expression ratios for deciduous/permanent dental pulp tissues.
  • Table 4. DCt values of deciduous and permanent dental pulp tissues.
  • Table 5. mRNA expression ratios for permanent/deciduous dental pulp tissues.

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Kim, J. H., Jeon, M., Song, J. S., Lee, J. H., Choi, B. J., Jung, H. S., … Kim, S. O. (2014). Distinctive genetic activity pattern of the human dental pulp between deciduous and permanent teeth. PLoS ONE, 9(7). https://doi.org/10.1371/journal.pone.0102893

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