Initial colony morphology-based selection for iPS cells derived from adult fibroblasts is substantially improved by temporary UTF1-based selection

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Abstract

Background: Somatic cells can be reprogrammed into induced pluripotent stem (iPS) cells. Recently, selection of fully reprogrammed cells was achieved based on colony morphology reminiscent of embryonic stem (ES) cells. The maintenance of pluripotency was analysed. Methodology/Principal Findings: Clonal murine iPS cell line TiB7-4, which was derived from adult fibroblasts, was analysed for maintenance of pluripotency. Colony morphology, expression of pluripotency factors and stage specific embryonic antigen 1 (SSEA1) were analysed by real time PCR and flow cytometry. We found the iPS cell line TiB7-4 and its subclones to be rather diverse and exhibiting a tendency towards spontaneous differentiation and loss of pluripotency independent of their initial colony morphology. In contrast an undifferentiated transcription factor 1 (UTF1) promoter-driven G418 (Neo) resistance significantly improved the quality of these iPS cells. After selection with UTF-Neo for two weeks iPS subclones could be stably maintained for at least 40 passages in culture and differentiate into all three germ layers. As control, a construct expressing G418 resistance under the control of the ubiquitously active SV40 early promoter formed subclones with different colony morphology. Some of these subclones could be cultured for at least 12 passages without loosing their pluripotency, but loss of pluripotency eventually occured in an unpredictable manner and was independent of the subclones' initial morphology and SSEA1 expression. A UTF-Neo-based selection of a whole population of TiB7-4 without further subcloning resulted in the generation of cultures with up to 99% SSEA1 positive cells under stringent selection conditions. Conclusions: Our data indicate that temporary selection using a genetic UTF1-based system can generate homogenous pluripotent iPS cells that can be maintained without permanent selection pressure. © 2010 Pfannkuche et al.

Figures

  • Figure 1. Morphology and SSEA 1 expression of wildtype TiB74 iPS cells. a) Morphology of TiB7-4 cultures at different passages of culture. b) Expression of stage specific embryonic antigen (SSEA1) at different passages of culture determined by flow cytometry. doi:10.1371/journal.pone.0009580.g001
  • Figure 2. Characterization of three individual, UTF1-Neo selected iPS cell clones UTF-1, -2 and -3 derived from TiB7-4 cells. a) Morphology of UTF-Neo selected iPS cells six and forty passages after transfection. Selection with G418 was performed only until initial isolation of colonies. b) Expression of SSEA1 of UTF-1, -2 and –3 as indicated by flow cytometry four and eleven passages after transfection. c) Alkaline Phosphatase staining of UTF-1, -2 and –3. doi:10.1371/journal.pone.0009580.g002
  • Figure 4. In vitro differentiation of UTF-Neo selected iPS clones UTF-1, -2 and –3. Embryoid bodies (EBs) were formed and cultured for up to twelve days. Cell samples were collected from undifferentiated cells as well as from EBs on day four, eight and twelve of differentiation and cDNA was prepared. Conventional reverse transcriptase PCR was used to test for marker gene expression indicative of formation of all three germlayers. doi:10.1371/journal.pone.0009580.g004
  • Figure 7. Non-clonal selection of iPS cells with UTF-Neo. Cultures of TiB7-4 iPS cells at passage 11 show flat growing cells with varying expressions of alkaline phosphatase (a) and contain clusters of cells that stain strongly for alkaline phosphatase (arrows) (b). When assayed for the expression of SSEA1 (c) the total amount of SSEA1 expressing cells was determined as 16% (black line). After transfection with UTF-Neo and selection on gelatine with 6 mg/ml G418 the flat growing cells vanish and sharp colonies with strong alkaline phosphatase (d,e,f) expression remain. Embryonic stem cells line Bruce4 (passage 26) displayed 84% SSEA1 positive cells (black line, g). UTF-Neo selected cells on feeder displayed 93% SSEA1 positive cells (h). UTF-Neo selected cells under continuous selection pressure on gelatine contained 99% SSEA1 positive cells with high expression of the surface marker (i). Colony morphology of Bruce4 ES cells (j) and UTF-Neo selected cells (k,l) were compared by phase contrast microscopy. doi:10.1371/journal.pone.0009580.g007
  • Table 1. Primers used for RT-PCR and proof of transgene integration.

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Pfannkuche, K., Fatima, A., Gupta, M. K., Dieterich, R., & Hescheler, J. (2010). Initial colony morphology-based selection for iPS cells derived from adult fibroblasts is substantially improved by temporary UTF1-based selection. PLoS ONE, 5(3). https://doi.org/10.1371/journal.pone.0009580

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