Enhanced biocatalytic degradation of lignin using combinations of lignin-degrading enzymes and accessory enzymes

Abstract

Methods for screening combinations of lignin-degrading enzymes and accessory enzymes for product release from polymeric lignin have been developed, using two colorimetric assays that can be applied in microtiter plate format. A set of 3 bacterial DyP-type peroxidase enzymes fromPseudomonas fluorescens,Comamonas testosteroniandAgrobacteriumsp., two bacterial multi-copper oxidase enzymes CueO fromOchrobactrumsp. and CopA fromPseudomonas putida, andSphingobacteriumsp. T2 manganese superoxide dismutase have been tested in combination with one LigE β-etherase enzyme fromAgrobacteriumsp., two dihydrolipoamide dehydrogenase enzymes fromSphingobacteriumsp. T2,Burkholderia cenocepaciaperoxiredoxin, andDesulfitobacterium hafniensearylsulfotransferase. Combinations ofAgrobacteriumLigE with DyP-type peroxidases gave 4-10 enhancement in low molecular weight product release from technical lignins, and enhancements in product release were observed for all lignins tested, using different accessory enzymes. Analysis of products formed by reverse phase HPLC verified increases in concentrations of specific low molecular weight products.