Longest common subsequence in at least k length order-isomorphic substrings

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Abstract

We consider the longest common subsequence (LCS) problem with the restriction that the common subsequence is required to consist of at least k length substrings. First, we show an O(mn) time algorithm for the problem which gives a better worst-case running time than existing algorithms, where m and n are lengths of the input strings. Furthermore, we mainly consider the LCS in at least k length order-isomorphic substrings problem. We show that the problem can also be solved in O(mn) worst-case time by an easy-to-implement algorithm.

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Ueki, Y., Diptarama, Kurihara, M., Matsuoka, Y., Narisawa, K., Yoshinaka, R., … Shinohara, A. (2017). Longest common subsequence in at least k length order-isomorphic substrings. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) (Vol. 10139 LNCS, pp. 363–374). Springer Verlag. https://doi.org/10.1007/978-3-319-51963-0_28

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