On-line construction of position heaps

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Abstract

We propose a simple linear-time on-line algorithm for constructing a position heap for a string [EMOW11]. Our definition of position heap differs slightly from the one proposed in [EMOW11] in that it considers the suffixes ordered in the descending order of length. Our construction is based on classic suffix pointers and resembles the Ukkonen's algorithm for suffix trees [Ukk95]. Using suffix pointers, the position heap can be extended into the augmented position heap that allows for a linear-time string matching algorithm [EMOW11]. © 2011 Springer-Verlag.

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Kucherov, G. (2011). On-line construction of position heaps. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) (Vol. 7024 LNCS, pp. 326–337). https://doi.org/10.1007/978-3-642-24583-1_32

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