Transferring from ex-vivo to in-vivo: Instrument Localization in 3D Cardiac Ultrasound Using Pyramid-UNet with Hybrid Loss

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Abstract

Automated instrument localization during cardiac interventions is essential to accurately and efficiently interpret a 3D ultrasound (US) image. In this paper, we propose a method to automatically localize the cardiac intervention instrument (RF-ablation catheter or guidewire) in a 3D US volume. We propose a Pyramid-UNet, which exploits the multi-scale information for better segmentation performance. Furthermore, a hybrid loss function is introduced, which consists of contextual loss and class-balanced focal loss, to enhance the performance of the network in cardiac US images. We have collected a challenging ex-vivo dataset to validate our method, which achieves a Dice score of 69.6% being 18.8% higher than the state-of-the-art methods. Moreover, with the pre-trained model on the ex-vivo dataset, our method can be easily adapted to the in-vivo dataset with several iterations and then achieves a Dice score of 65.8% for a different instrument. With segmentation, instruments can be localized with an average error less than 3 voxels in both datasets. To the best of our knowledge, this is the first work to validate the image-based method on in-vivo cardiac datasets.

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Yang, H., Shan, C., Tan, T., Kolen, A. F., & de With, P. H. N. (2019). Transferring from ex-vivo to in-vivo: Instrument Localization in 3D Cardiac Ultrasound Using Pyramid-UNet with Hybrid Loss. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) (Vol. 11768 LNCS, pp. 263–271). Springer Science and Business Media Deutschland GmbH. https://doi.org/10.1007/978-3-030-32254-0_30

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