Biological regulatory networks can be represented by computational models, which allow the study and the analysis of biological behaviours, therefore providing a better understanding of a given biological process. However, as new information is acquired, biological models may need to be revised, in order to also account for this new information. Here, we present a model revision tool, capable of repairing inconsistent Boolean biological models. Moreover, the tool is able to confront the models, both with steady state observations, as well as time-series data, considering both synchronous and asynchronous update schemes. The tool was tested with a well-known biological model that was corrupted with different random changes. The presented tool was able to successfully repair the majority of the corrupted models.
CITATION STYLE
Gouveia, F., Lynce, I., & Monteiro, P. T. (2020). ModRev - Model Revision Tool for Boolean Logical Models of Biological Regulatory Networks. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) (Vol. 12314 LNBI, pp. 339–348). Springer Science and Business Media Deutschland GmbH. https://doi.org/10.1007/978-3-030-60327-4_18
Mendeley helps you to discover research relevant for your work.