TargetIdentifier: A webserver for identifying full-length cDNAs from EST sequences

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Abstract

TargetIdentifier is a webserver that identifies full-length cDNA sequences from the expressed sequence tag (EST)-derived contig and singleton data. To accomplish this TargetIdentifier uses BLASTX alignments as a guide to locate protein coding regions and potential start and stop codons. This information is then used to determine whether the EST-derived sequences include their translation start codons. The algorithm also uses the BLASTX output to assign putative functions to the query sequences. The server is available at https://fungalgenome.concordia.ca/tools/TargetIdentifier.html. © 2005 Oxford University Press.

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Min, X. J., Butler, G., Storms, R., & Tsang, A. (2005). TargetIdentifier: A webserver for identifying full-length cDNAs from EST sequences. Nucleic Acids Research, 33(SUPPL. 2). https://doi.org/10.1093/nar/gki436

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