DecoMine: A Compilation-Based Graph Pattern Mining System with Pattern Decomposition

Abstract

Graph pattern mining (GPM) is an important application that identifies structures from graphs. Despite the recent progress, the performance gap between the state-of-the-art GPM systems and an efficient algorithm - pattern decomposition - is still at least an order of magnitude. This paper clears the fundamental obstacles of adopting pattern decomposition to a GPM system. First, the performance of pattern decomposition algorithms depends on how to decompose the whole pattern into subpatterns. The original method performs complexity analysis of algorithms for different choices, and selects the one with the lowest complexity upper bound. Clearly, this approach is not feasible for average or even expert users. To solve this problem, we develop a GPM compiler with conventional and GPM-specific optimizations to generate algorithms for different decomposition choices, which are evaluated based on an accurate cost model. The executable of the GPM task is obtained from the algorithm with the best performance. Second, we propose a novel partial-embedding API that is sufficient to construct advanced GPM applications while preserving pattern decomposition algorithm advantages. Compared to state-of-the-art systems, our new GPM system, DecoMine, developed based on the ideas, reduces the execution time of GPM on large graphs and patterns from days to a few hours with low programming effort.