Algorithm for Protein Sequence Alignment using Hadoop

  • Khaire* S
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To develop an efficient system for matching the biological protein sequences and generating the scoring matrix using a distributed scan approach by applying Smith-Waterman(SW) algorithm. The algorithm generates fatest solution and the proposed system is comparing sequences with System, OpenMP and Hadoop. The comparison of the system leads in generating an efficient matrix of the protein sequence, beneficial for predicting the efficiency of the system.




Khaire*, S. A. (2019). Algorithm for Protein Sequence Alignment using Hadoop. International Journal of Innovative Technology and Exploring Engineering, 2(9), 2146–2147.

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