Investigations on stability and overoptimism of classification trees by using cross-validation

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Abstract

Development of classification rules is often based on tree methodology. Using data from a diagnostic study where Doppler flow signals were measured to separate between malignant and benign breast tumors I will discuss issues of searching for the cutpoint of continuous variables with a minimal p-value and the necessity to correct this p-value because of multiple testing. Ignoring the correction will strongly favor continuous variables in tree development and may lead to useless trees. I will further investigate the influence of the complexity of a tree by estimating the overoptimism as the difference from the apparent error rates based on the original data to estimated error rates based on 5-fold crossvalidation. Furthermore I consider the use of predefined cutpoint on the development of trees and the resulting error rates.

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Sauerbrei, W. (2001). Investigations on stability and overoptimism of classification trees by using cross-validation. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) (Vol. 2199, pp. 251–257). Springer Verlag. https://doi.org/10.1007/3-540-45497-7_38

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