The diffusion of perturbations in a model of coupled random boolean networks

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Abstract

Deciphering the influence of the interaction among the constituents of a complex system on the overall behaviour is one of the main goals of complex systems science. The model we present in this work is a 2D square cellular automaton whose of each cell is occupied by a complete random Boolean network. Random Boolean networks are a well-known simplified model of genetic regulatory networks and this model of interacting RBNs may be therefore regarded as a simplified model of a tissue or a monoclonal colony. The mechanism of cell-to-cell interaction is here simulated letting some nodes of a particular network being influenced by the state of some nodes belonging to its neighbouring cells. One possible means to investigate the overall dynamics of a complex system is studying its response to perturbations. Our analyses follow this methodological approach. Even though the dynamics of the system is far from trivial we could show in a clear way how the interaction affects the dynamics and the global degree of order. © 2008 Springer-Verlag Berlin Heidelberg.

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Serra, R., Villani, M., Damiani, C., Graudenzi, A., & Colacci, A. (2008). The diffusion of perturbations in a model of coupled random boolean networks. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) (Vol. 5191 LNCS, pp. 315–322). https://doi.org/10.1007/978-3-540-79992-4_40

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