Complete Genes May Pass from Food to Human Blood

53Citations
Citations of this article
262Readers
Mendeley users who have this article in their library.

Abstract

Our bloodstream is considered to be an environment well separated from the outside world and the digestive tract. According to the standard paradigm large macromolecules consumed with food cannot pass directly to the circulatory system. During digestion proteins and DNA are thought to be degraded into small constituents, amino acids and nucleic acids, respectively, and then absorbed by a complex active process and distributed to various parts of the body through the circulation system. Here, based on the analysis of over 1000 human samples from four independent studies, we report evidence that meal-derived DNA fragments which are large enough to carry complete genes can avoid degradation and through an unknown mechanism enter the human circulation system. In one of the blood samples the relative concentration of plant DNA is higher than the human DNA. The plant DNA concentration shows a surprisingly precise log-normal distribution in the plasma samples while non-plasma (cord blood) control sample was found to be free of plant DNA. © 2013 Spisak et al.

Figures

  • Figure 1. Coverage of the tomato chloroplast in the IBD sample. Small gray dots indicate the counts of alignments at individual nucleotide positions, darker shades are the result of several overlapping points. The orange line is the smoothed coverage of the tomato chloroplast, while the short gray dash indicates the average coverage level of the human genome for the same sample. doi:10.1371/journal.pone.0069805.g001
  • Table 1. The accession numbers and names of the plants.
  • Table 1. Cont.
  • Table 1. Cont.
  • Table 2. The initial number of sequence reads and the ones matching the chloroplast genome collection.
  • Figure 2. Brassica rapa chloroplast coverage pileup for the DRP000446 study. The gray spikes shows the counts of alignments at individual nucleotide positions (vertical scale is logarithmic). 27742 nucleotide positions of the total 180852 are covered. There are two regions around 100,000 and 135,000 where the coverage is more than 10 times than at other parts of the chloroplast. These are the regions where the ribosomal RNA genes are found which share very similar sequence with other chloroplasts and bacterial genomes. Indeed if we BLAST all the 1634 reads that matched the chloroplast genomes against the NCBI reference sequence database, 733 of them also match various bacterial genomes, but 897 does not match any other organisms, just plants. Removing those alignments that match bacterial genomes too, (gray spikes) makes the distribution more uniform. doi:10.1371/journal.pone.0069805.g002
  • Figure 3. The cumulative distribution of plant DNA amount for over 900 subjects. It (black dots) can be fitted with log-normal distribution (red curve) above the sensitivity cutoff (0.35). The gray shaded band is the result of the simulation of 300 realizations of the log-normal process with taking into account the varying sizes of the samples. Among the independent samples (larger dots), the ones from patients with inflammatory diseases (IBD, DRP000446) have the largest concentration. For the SRP016573 sample only the maternal plasma concentration is shown, full blood samples with 0.001 ppm and 0.004 ppm and cord blood samples with zero alignments are omitted from the figure. doi:10.1371/journal.pone.0069805.g003
  • Figure 4. This heatmap shows the number of chloroplast matching reads on a log2 scale for the SRP009039 study. From the total 903 subjects the ones with the largest number of matches are shown (only the plant genomes with more than 50, and only the subjects with more than 10 matching reads), the rows are the plant species, the columns are the samples. The automatic clustering recovers the related plant species and the subjects can be also grouped by the food types. doi:10.1371/journal.pone.0069805.g004

References Powered by Scopus

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

16927Citations
N/AReaders
Get full text

An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG III

4449Citations
N/AReaders
Get full text

A greedy algorithm for aligning DNA sequences

4282Citations
N/AReaders
Get full text

Cited by Powered by Scopus

Trends in glyphosate herbicide use in the United States and globally

1348Citations
N/AReaders
Get full text

Bringing cultured meat to market: Technical, socio-political, and regulatory challenges in cellular agriculture

497Citations
N/AReaders
Get full text

The diverse origins of circulating cell-free DNA in the human body: a critical re-evaluation of the literature

226Citations
N/AReaders
Get full text

Register to see more suggestions

Mendeley helps you to discover research relevant for your work.

Already have an account?

Cite

CITATION STYLE

APA

Spisák, S., Solymosi, N., Ittzés, P., Bodor, A., Kondor, D., Vattay, G., … Csabai, I. (2013). Complete Genes May Pass from Food to Human Blood. PLoS ONE, 8(7). https://doi.org/10.1371/journal.pone.0069805

Readers over time

‘13‘14‘15‘16‘17‘18‘19‘20‘21‘22‘23‘24‘25020406080

Readers' Seniority

Tooltip

PhD / Post grad / Masters / Doc 83

49%

Researcher 53

32%

Professor / Associate Prof. 28

17%

Lecturer / Post doc 4

2%

Readers' Discipline

Tooltip

Agricultural and Biological Sciences 101

62%

Biochemistry, Genetics and Molecular Bi... 43

27%

Medicine and Dentistry 11

7%

Pharmacology, Toxicology and Pharmaceut... 7

4%

Article Metrics

Tooltip
Mentions
Blog Mentions: 5
News Mentions: 14
Social Media
Shares, Likes & Comments: 415

Save time finding and organizing research with Mendeley

Sign up for free
0