Short-chain fatty acids mediate gut microbiota–brain communication and protect the blood–brain barrier integrity

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Abstract

The human gut, with a complex community of microbes, is essential for maintaining overall health. This gut microbiota engages in two-way communication with the central nervous system, collectively known as the gut microbiota−brain axis. Alterations in gut microbiota have been associated with various neurological disorders, and disruptions to the blood–brain barrier (BBB) may be crucial, though the exact mechanisms remain unknown. In the current study, we investigated the impacts of short-chain fatty acids (SCFAs) on the integrity of the BBB, which was compromised by orally administered antibiotics in rhesus monkeys and C57BL/6n mice. Our results showed that SCFA supplementation notably enhanced BBB integrity in rhesus monkeys with gut dysbiosis. Similar outcomes were observed in mice with gut dysbiosis, accompanied by decreased cortical claudin-5 mRNA levels. In particular, propionate, but not acetate or butyrate, could reverse the antibiotic-induced BBB permeability increase in mice. Additionally, in vitro studies demonstrated that propionate boosted the expression of tight junction proteins in brain endothelial cells. These results suggest that the propionate can maintain BBB integrity through a free fatty acid receptor 2–dependent mechanism. This study offers new insights into the gut−brain axis and underscores potential therapeutic targets for interventions based on gut microbiota.

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Chenghan, M., Wanxin, L., Bangcheng, Z., Yao, H., Qinxi, L., Ting, Z., … Zhihui, Z. (2025). Short-chain fatty acids mediate gut microbiota–brain communication and protect the blood–brain barrier integrity. Annals of the New York Academy of Sciences, 1545(1), 116–131. https://doi.org/10.1111/nyas.15299

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