A network-centric approach to drugging TNF-induced NF-κB signaling

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Abstract

Target-centric drug development strategies prioritize single-target potency in vitro and do not account for connectivity and multi-target effects within a signal transduction network. Here, we present a systems biology approach that combines transcriptomic and structural analyses with live-cell imaging to predict small molecule inhibitors of TNF-induced NF-κB signaling and elucidate the network response. We identify two first-in-class small molecules that inhibit the NF-κB signaling pathway by preventing the maturation of a rate-limiting multiprotein complex necessary for IKK activation. Our findings suggest that a network-centric drug discovery approach is a promising strategy to evaluate the impact of pharmacologic intervention in signaling.

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Pabon, N. A., Zhang, Q., Cruz, J. A., Schipper, D. L., Camacho, C. J., & Lee, R. E. C. (2019). A network-centric approach to drugging TNF-induced NF-κB signaling. Nature Communications, 10(1). https://doi.org/10.1038/s41467-019-08802-0

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