Schex avoids overplotting for large single-cell RNA-sequencing datasets

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Abstract

Summary: Due to the scale and sparsity of single-cell RNA-sequencing data, traditional plots can obscure vital information. Our R package schex overcomes this by implementing hexagonal binning, which has the additional advantages of improving speed and reducing storage for resulting plots.

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Freytag, S., & Lister, R. (2020). Schex avoids overplotting for large single-cell RNA-sequencing datasets. Bioinformatics, 36(7), 2291–2292. https://doi.org/10.1093/bioinformatics/btz907

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