Deep-learning-ready RGB-depth images of seedling development

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Abstract

In the era of machine learning-driven plant imaging, the production of annotated datasets is a very important contribution. In this data paper, a unique annotated dataset of seedling emergence kinetics is proposed. It is composed of almost 70,000 RGB-depth frames and more than 700,000 plant annotations. The dataset is shown valuable for training deep learning models and performing high-throughput phenotyping by imaging. The ability of such models to generalize to several species and outperform the state-of-the-art owing to the delivered dataset is demonstrated. We also discuss how this dataset raises new questions in plant phenotyping.

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Mercier, F., Couasnet, G., El Ghaziri, A., Bouhlel, N., Sarniguet, A., Marchi, M., … Rousseau, D. (2025). Deep-learning-ready RGB-depth images of seedling development. Plant Methods, 21(1). https://doi.org/10.1186/s13007-025-01334-3

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