Collective Calculation of Actual Values of Non-Photochemical Quenching from Their Apparent Values after Chloroplast Movement and Photoinhibition

Abstract

Chlorophyll fluorescence parameters such as Fv/Fm, NPQ and ΦII (YII) are widely used to estimate the fitness and photosynthetic activity of plant leaves and non-photochemical dissipation of excessive excitation energy in photosystem II. The effect of chloroplast movement on these fluorescence parameters reduces the accuracy of estimations of the size of de-excitation processes, but there is no method to calculate correct parameters from altered (fluctuated) parameters. Chloroplast movement was recently identified as the “middle” kinetic component of NPQ. In this paper, we devised a complex but reasonable mathematical method to remove the effect of chloroplast movement on fluorescence parameters, based on our previously reported fluorescence theory. The fraction of “S fluctuation” (designated as σ) was estimated from fluorescence observations and used to calculate the non-fluctuated Fs and fluorescence yields.